Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g4696 ATGCAGCCTTCACCTTCTTCCTCATCTTCTTCTCCTCCGGTTTCCTCCATTTCCTATCCGTTCACCTTCTCTCCCACCCATCACCACTCCTTCACGCCCCTTCCATCATTCCTCTTCCGACCCCTTCACCGATCTGCTTTCTTCTTCAGGAATGGGACTCGCGAGTGGGTTGTGATAAATTCAGAGAAAAACAAATGGGTTTTTGTTGAATCACTCAAAGGTTGTTCTTGCAAGAGTTTGGTGAGACGTGTGGGAGAACCGCTTCGTGCGTACATGGATCTCGAAGCTGGTCGAAAGAGATCAGGCCGAGAGGATATATACATTAGTTACCACGCTGAAGATGATGTACAGTCAACCTATGCCGGTTCCCTGTTTCACAATGGACGAAACTATCACGTCTCTAATACTAAAAACAGTGATATACTTGTTTATTGGTCTTCATCGCGGTGTCTTCCTCAAAGAAATGAACTTGCCAAGAAACTCCTCGGCTTGCTACCTAGCCATTCATTTGGCAAGTGCCTAAACAATGTCGGTGGTCTAGACATGGCTCTTTCGTTCTTTCCGAAAACACTTTCACCGAGAGCTACGTGA 591 0.4636 MQPSPSSSSSSPPVSSISYPFTFSPTHHHSFTPLPSFLFRPLHRSAFFFRNGTREWVVINSEKNKWVFVESLKGCSCKSLVRRVGEPLRAYMDLEAGRKRSGREDIYISYHAEDDVQSTYAGSLFHNGRNYHVSNTKNSDILVYWSSSRCLPQRNELAKKLLGLLPSHSFGKCLNNVGGLDMALSFFPKTLSPRAT* 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g4696 196 PANTHER ALPHA-(1,4)-FUCOSYLTRANSFERASE 80 186 - -
Psa3g4696 196 PANTHER ALPHA- 1,3 -FUCOSYLTRANSFERASE 80 186 IPR001503 GO:0006486|GO:0008417|GO:0016020
Psa3g4696 196 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 79 179 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g4696 Psa-Chr3 434844020 434845937 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g4696 80 192 Xyloglucan Fucosyltransferase1 AT1G71990 76.106 2.87e-59 189
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g4696 K14412 - gmx:100791990 209.534