Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g4667 ATGCGGATGAGTTGTAACGGTTGTCGTGTACTAAGAAAAGGTTGCAGTGAAAATTGTAGCATAAGACCATGTTTGCAATGGATCAAAAACCCTGAATCACAAGCTAATGCCACCGTCTTTTTAGCTAAATTCTACGGTCGTGCCGGTCTCATGAACCTCGTCAACGCCGGTCCCGAACATCTTCGCCCAGCAATTTTTCGATCGTTGTTGTATGAAGCATGTGGTCGAATAGTGAACCCAATTTACGGTTCAGTTGGTTTACTATGGTCGGGGAGCTGGCAGCTATGTCAAGCCGCGGTGGAAGCCGTTTTAAAAGGCGCGCCGATTACGCCGATTACTTCAGAAGCGGCTACTCATGGAAGGGGTCCACCACTGAAGGCCTATGACATACGCCACGTGTCAAAAGACGAGAACTCGGCCGCGTCTAATGAGTTGACTCAGCAGCGAGTCAAGACGCGATCTCGTAAGCGATCTAGCTTGGCTAAGCCGAAGTTACAAGAGGAGGTGAAGAGTGGGAATGATGATAAGAGAATTGAATTCGGTTCGGTTGAACCGGTTGAAGAGGTTATTGTGAACCGGGCTGGGAGTCATGAGTCGTCAATTAGCCATCAGTCTGAGGCGGTGAACGCGGCGGTGGTGGTGGATTTGGAGAGTAAAGAGAGTGAAAGTATGGCTTCCGTGGAAACTGCGGAGACTTCGATGAACTTGTTTAGAGATGAACCGGAGCCGAACCGGGGTTTGAAGGGGATGGAGCGAACCGGTGAGGAGAATGTTGGGTTAGAGCTTACTCTTGGGTTGGAACCGGTTTCGCGTGTTTATCATGTGGTTCCTGTGAAGAAAAGGAGGGTTGAGTTGAAGGATTGTGGTGGCGGTTCGTGGAATGTAGAGCTGGGTCTTCAATATCCGGTTTAG 912 0.4956 MRMSCNGCRVLRKGCSENCSIRPCLQWIKNPESQANATVFLAKFYGRAGLMNLVNAGPEHLRPAIFRSLLYEACGRIVNPIYGSVGLLWSGSWQLCQAAVEAVLKGAPITPITSEAATHGRGPPLKAYDIRHVSKDENSAASNELTQQRVKTRSRKRSSLAKPKLQEEVKSGNDDKRIEFGSVEPVEEVIVNRAGSHESSISHQSEAVNAAVVVDLESKESESMASVETAETSMNLFRDEPEPNRGLKGMERTGEENVGLELTLGLEPVSRVYHVVPVKKRRVELKDCGGGSWNVELGLQYPV* 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g4667 303 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 1 284 - -
Psa3g4667 303 ProSiteProfiles LOB domain profile. 3 109 IPR004883 -
Psa3g4667 303 PIRSF AS2 1 298 IPR017414 -
Psa3g4667 303 Pfam Lateral organ boundaries (LOB) domain 4 103 IPR004883 -
Psa3g4667 303 MobiDBLite consensus disorder prediction 136 173 - -
Psa3g4667 303 PANTHER LOB DOMAIN-CONTAINING PROTEIN 40 1 284 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g4667 Psa-Chr3 433871942 433874048 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g4667 1 283 AS2 family AT3G02550 58.304 1.79e-108 314
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Psa3g4667 LOB 1.6e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g4667 - - lja:Lj1g3v3317390.1 437.573
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa3g4667 3 433871942 433874048 Psa3g4667 3 433871942 433874048 ECH