Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g4659 ATGTCAAACTCCAAAAACAACAAATTTCACCCTAAAATCACTCTATTATCTCTCTTTTTGCTATTCTCCACCCTAGTTGTTAACTCATACAATCCTGATTACACTTTAGCAATCAATTGTGGCACCTCAGCAAACACTACTGCATACAATCGAACTTGGGTTGGTGACAGTAATGATAACTCCAATATCTTTTCCTTCATTGAACCAAAAACCACTGGCTCATCACTTACACCACAACCTAATTCCCTTTCCAGTCTCGAAACTCCATTCACAACCGCACGTATTTCTCTCTCAAATTTCACATACTCATTCTCTAGCATCACTTCTTCCCCTGTTTTCATTCGCCTTCATTTTTACTCAACTTCGTACAACTATAGTTTTGAACCTTCTAATGCAGTTTTTTCTGTTATAGTAAACAACAATCTTACCCTTCTTAAAAACTTCAACCCTTATCTTTGGCTTCATGATGACGATGAGGAGAAAATCACCAAAGAATATTGCATCCAAATCGAACCATCTGAGAAGCTAAACATAACTTTCATTCCCAACGACAAAAACCAATCAAATGTTTATTATGCTTTCATTAACGGAATTGAAGTTGTGTCTCTGCCTTCTTTTCTCTATTACACTGATCTCGATGACACAAACTATCACTTCAACTTACTCGGCTTTGACAACAGCGCTAACCCATACCAAATTCGAAGAGACAAAGCATTAGAGATGGTTTATAGAGTCAACGTTGGTGGTTCTCAAGTTCCAGCAAATGATGATACAGGTATGTTTCGTTATTGGGACAACGATTTCTATAGGTACTTGCAGAAACGGTATCCACAAAGTGAATCATCTGATTTCAGCCATCATCTTAACTATTTACACAATACCATTCCAAATTATACTGCACCAGAAATTGTATACATAACTGGAAGAAGTTATGGAATGTATGAGACAGAGAACTTTAATGTAACATGGAATTTTGAAGTTGATTCTGCTTTTACTTATATGGTAAGGTTACATTTTTGTGAGTTTGACTATCATATGAAAAATAAAGGGGATAGAGTTTTTCAGATTTTTATAAATGATGTTATGGCTGAACAAGGTGCTGATGTGATTTATTGGAGTGGTGCTCCTTTGGTTCCGGTTCATAAGGACTATGCTGTGATTATGAACTCTCAAGAAGGAAACTCTCAAATTGAAAGAGTCAATCTATCAATCAAGCTTCAACGAGCACCGCAAACTATCTACACAAAATACCTTGAGGTCTTACTGAATGGAATTGAGATTTTTAAAGTAAGTGATGGAAGTAACAATCTTGCAGGATTGAATCCCAAATATTTATCACCAAAAGAACCAGTATTATCAAATCAGCCGCCGAAGTCAAAGAAATCACACATGGTCATGGTTGTTGCAGTTGGAGTTTCGTGTCTCTTTCTAGCATTTGCTGTTGTGGGAACAATAGTTTTTGTTAGAAGGAGAAGAAGATTTGAATCTCATACACAAATGGAAGAAAGTTCATGGAAAACAAGGAAAGAAAGTTCCTCAACTTTACCATCCCACTTGTGCCGCTATTTTACAATAGCGGAGATCAGAGCTGCTACAAACAACTTCGATGATATTTTCATCATCGGAGTTGGAGGGTTTGGCGACGTGTACAAAGGTTACGTTGATGGAGCTACCCCCGTTGCTATAAAACGTTTAAAATCGGGCTCTCAGCAAGGCGAAAACGAGTTCTTGAACGAGATCGAGTTGCTTTCTCAACTTCGTCATAATCACTTGGTTTCCCTTATTGGATATTGCAACGATGGTGCAGAGATGATTCTTGTTTACGACTTCATGCAGCGCGGTACTCTTCGTGAGTATCTCTATGGTTCGGATTCGGGCAATGAACCTCTTACATGGAAGCAAAGACTCGAGATTCTACTAGATAAGAAAAATGTGAGTTTGGTTGTTCGTTTTCAAAGATGTTACAATGAAGGTGTGATAATTGAAGAGATGGTGGATCCATTCATAAAGGATTCTATAACAGATGAGTGTTTGAGATGTTACTGCCAAATGGCGTTGAGTTGTTTGCATGATGATGGAAGTCAAAGGATGTCGATGAGTGATGTTGTTGGAGCTTTAGAGTTTGCATTGCAGTTGGAGATGACTCAGGAAAAGGAAAAGAGTGAGCAGAGGATACAATATCCAAAGTTTGCGAGTGATGATGGGAGTGAGATGCGTTTCACGAGTAGTAGTGGTGACTATGGGTCTCATACAAGTAAGGTAAGCACCATTTCAGCAACTAGTGAAGATCAACCTTTGTTTTCTACTCATGTGTTTTCTGAAGTTGGGTATCCAAAAGCACGGTAG 2346 0.3824 MSNSKNNKFHPKITLLSLFLLFSTLVVNSYNPDYTLAINCGTSANTTAYNRTWVGDSNDNSNIFSFIEPKTTGSSLTPQPNSLSSLETPFTTARISLSNFTYSFSSITSSPVFIRLHFYSTSYNYSFEPSNAVFSVIVNNNLTLLKNFNPYLWLHDDDEEKITKEYCIQIEPSEKLNITFIPNDKNQSNVYYAFINGIEVVSLPSFLYYTDLDDTNYHFNLLGFDNSANPYQIRRDKALEMVYRVNVGGSQVPANDDTGMFRYWDNDFYRYLQKRYPQSESSDFSHHLNYLHNTIPNYTAPEIVYITGRSYGMYETENFNVTWNFEVDSAFTYMVRLHFCEFDYHMKNKGDRVFQIFINDVMAEQGADVIYWSGAPLVPVHKDYAVIMNSQEGNSQIERVNLSIKLQRAPQTIYTKYLEVLLNGIEIFKVSDGSNNLAGLNPKYLSPKEPVLSNQPPKSKKSHMVMVVAVGVSCLFLAFAVVGTIVFVRRRRRFESHTQMEESSWKTRKESSSTLPSHLCRYFTIAEIRAATNNFDDIFIIGVGGFGDVYKGYVDGATPVAIKRLKSGSQQGENEFLNEIELLSQLRHNHLVSLIGYCNDGAEMILVYDFMQRGTLREYLYGSDSGNEPLTWKQRLEILLDKKNVSLVVRFQRCYNEGVIIEEMVDPFIKDSITDECLRCYCQMALSCLHDDGSQRMSMSDVVGALEFALQLEMTQEKEKSEQRIQYPKFASDDGSEMRFTSSSGDYGSHTSKVSTISATSEDQPLFSTHVFSEVGYPKAR* 782
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g4659 781 PANTHER CARBOHYDRATE-BINDING PROTEIN OF THE ER PROTEIN 28 641 - -
Psa3g4659 781 PANTHER CARBOHYDRATE-BINDING PROTEIN OF THE ER PROTEIN 640 761 - -
Psa3g4659 781 PANTHER OS07G0166700 PROTEIN 640 761 IPR045272 GO:0004714|GO:0006468
Psa3g4659 781 PANTHER OS07G0166700 PROTEIN 28 641 IPR045272 GO:0004714|GO:0006468
Psa3g4659 781 SUPERFAMILY Protein kinase-like (PK-like) 510 640 IPR011009 -
Psa3g4659 781 Pfam Malectin-like domain 38 430 IPR024788 -
Psa3g4659 781 ProSiteProfiles Protein kinase domain profile. 535 781 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa3g4659 781 Gene3D Transferase(Phosphotransferase) domain 1 642 734 - -
Psa3g4659 781 Gene3D Transferase(Phosphotransferase) domain 1 517 641 - -
Psa3g4659 781 Pfam Protein tyrosine and serine/threonine kinase 541 639 IPR001245 GO:0004672|GO:0006468
Psa3g4659 781 Gene3D - 31 203 - -
Psa3g4659 781 Gene3D - 237 431 - -
Psa3g4659 781 ProSitePatterns Protein kinases ATP-binding region signature. 541 563 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g4659 Psa-Chr3 432486469 432489645 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g4659 655 781 Receptor kinase-like Gene Family AT5G39000 32.576 5.14e-13 70.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Psa3g4659 Malectin_like 5.8e-37 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g4659 - - mtr:MTR_7g015420 872.848
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa3g4659 3 432486469 432489645 Psa3g4659 3 432486469 432489645 ECH