Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g4656 ATGGCCCATTCTTTCGGTCAAGCCGAGATTAATTGGGACAAGCTAGATAAAACTAAGTTTTATGTGGTAGGAGCTGGACTCTTTACCGGTGTTACGGTAGCACTTTATCCGGTTTCAGTTGTGAAAACTAGGCTGCAGGTTGCAACTAAGGGGGCTGTGGAGAAAAATGCCTATTCTGTTGCAAAAGGATTACTTAAAACAGATGGCATCCCTGGTCTGTATAAAGGGTTTGGTACGGTTATCACTGGTGCAATACCGGCCAGAATCATATTCATGTCGGTTCTTGAGACCACAAAGGTGTATGCCTTTAAAATGGTGAAACCATTTGGACTATCTGAAACTACTCAGGCTGCCGTAGCAAATGGATTTGCAGGCATGACATCGTCACTTTTTGCTCAATCTGTGTTTGTACCAATTGATGTGGTTAGCCAAAAGTTGATGGTGCAAGGATACTCAGGCCATGCCCAATATAGTGGGGGTCTGGATGTTGCCCGTAAGATTATAAGGTCTGATGGCATTAAGGGATTGTATCGAGGGTTTGGTCTTTCTGTTGTTACTTATGCACCTTCTAGCGCAGTTTGGTGGGCAAGTTATGGTTCAAGCCAACGGTTCATTTGGAGATTCTTGGACCAAGGTGCCAAACACGATGAAGGCACTCCCAGTGTGCTGAAGATCATGTTAGTTCAGGCTGCAGGAGGGGTTATTGCCGGTGCAACTGCATCCTGCATTACAACCCCATTTGATACTATCAAGACACGGTTACAGGTGATGGGACATGAAAATAAAAGCTCTATAAAACAAGTTACTAAAGCTTTAATCAAAGAAGATGGTTGGAAAGGCCTATATAGAGGGTTTGGTCCAAGATTTTTTAGCATGTCAGCATGGGGCACATCAATGATATTGACTTATGAATATCTGAAACGATTATGCGCAATAGAGGAATAG 945 0.4328 MAHSFGQAEINWDKLDKTKFYVVGAGLFTGVTVALYPVSVVKTRLQVATKGAVEKNAYSVAKGLLKTDGIPGLYKGFGTVITGAIPARIIFMSVLETTKVYAFKMVKPFGLSETTQAAVANGFAGMTSSLFAQSVFVPIDVVSQKLMVQGYSGHAQYSGGLDVARKIIRSDGIKGLYRGFGLSVVTYAPSSAVWWASYGSSQRFIWRFLDQGAKHDEGTPSVLKIMLVQAAGGVIAGATASCITTPFDTIKTRLQVMGHENKSSIKQVTKALIKEDGWKGLYRGFGPRFFSMSAWGTSMILTYEYLKRLCAIEE* 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g4656 314 ProSiteProfiles Solute carrier (Solcar) repeat profile. 224 309 IPR018108 -
Psa3g4656 314 PANTHER MITOCHONDRIAL CARRIER PROTEIN-RELATED 7 313 - -
Psa3g4656 314 PRINTS Mitochondrial carrier protein signature 33 47 IPR002067 GO:0055085
Psa3g4656 314 PRINTS Mitochondrial carrier protein signature 177 195 IPR002067 GO:0055085
Psa3g4656 314 PRINTS Mitochondrial carrier protein signature 233 255 IPR002067 GO:0055085
Psa3g4656 314 Gene3D Mitochondrial carrier domain 17 313 IPR023395 -
Psa3g4656 314 Pfam Mitochondrial carrier protein 228 310 IPR018108 -
Psa3g4656 314 Pfam Mitochondrial carrier protein 118 205 IPR018108 -
Psa3g4656 314 Pfam Mitochondrial carrier protein 25 104 IPR018108 -
Psa3g4656 314 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J 7 313 - -
Psa3g4656 314 SUPERFAMILY Mitochondrial carrier 13 306 IPR023395 -
Psa3g4656 314 ProSiteProfiles Solute carrier (Solcar) repeat profile. 116 204 IPR018108 -
Psa3g4656 314 ProSiteProfiles Solute carrier (Solcar) repeat profile. 17 101 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g4656 Psa-Chr3 432269534 432277124 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g4656 10 314 Chloroplast and Mitochondria Gene Families AT5G15640 75.896 5.69e-172 477
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g4656 K15121 - gmx:100781796 548.895
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa3g4656 3 432269534 432277124 Psa3g4656 3 432269534 432277124 ECH