Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g4654 ATGAGGCTTCTTATATCAGCTCTATGTCTCACTGTGCTATGTTCTTATGCAGCGGCGTATGATCCTTTGGATCCTGACGGAAACATAACAATCAAATGGGATGTTGTGTCCTGGACACCAGATGGCTATGTGGCGGTCGTAACGATGAGCAATTTCCAAATGTACCGACACATAATGAATCCGGGATGGACATTAGGATGGTCATGGGCTAAGAAAGAAGTTATATGGTCAATGGTAGGATCTCAAACAACTGAGCAAGGAGATTGTTCTAAATTCAAAGGAAATGTGCCTCATTGCTGCAAGAAAACTCCAACAGTTGTAGACCTTCTCCCTGGTGTACCTTACAACCTACAATTCTCAAACTGTTGTAAGGGTGGAGTTGTAGCAGCATGGGGACAAGACCCTTCATCAGCTGTTTCATCTTTTCAAATCAGTGTTGGACAAGGTGGTACTTCAAATAAGACAGTTAAACTTCCTAAGAACTTCACGCTTTCGGCTCCCGGACCCGGCTATACTTGCGGTCCTGCTAAGGTTGTTCCGTCCACCACTTTTCTCACCTCGGATAAGCGCCGCAAAACTCAAGCACTTATGACATGGAATGTAACATGTACATATTCACAATTTCTTGCAAGAAAGAATCCAAGTTGTTGTGTATCTTTGTCATCTTTCTATAATGAGACTATTACTCCTTGTCCTTCTTGTGCTTGTGGATGCCAGAACAAGAAGAATTGTGTCAAGGGTCATTCCAAATTCCTGGACATGGTAGGGTTACATACACCAAAGAGAGACAATGAACCATTGCTACAATGCACTCATCATATGTGCCCTATCAGGGTACACTGGCATGTGAAGGTTAACTATAAGGACTATTGGAGAGTCAAGATAGCTGTGACAAACTTCAATTATAGATTGAATTATTCTCTTTGGACTCTTGCTGTACAACATCCAAATCTTAACAATGTCACCCAAGTTTTCAGCTTTGATTACAAGCCTCTACTTCCCTATCAATCCATAAATGACACAGGTATGTTCTATGGCATGAAATTCTTCAACGATCTCTTGATGGAAGCTGGACCAAGTGGAAATGTTCAATCAGAAGTGCTTCTTCAAAAGAACAAGGAAACATTCACTTTCAACCAAGGATGGGCATTTCCTAGAAGAGTCTACTTCAATGGTGAAGAATGCATGATGCCACCACCAGATACCTACCCTTACCTCCCCAATTCTTCCCCTATCAATACCCTCAACTTCCAAGCATTATTTACCTCATTCCTTCTCTTGCTAGCTCTCTGCTGA 1296 0.4198 MRLLISALCLTVLCSYAAAYDPLDPDGNITIKWDVVSWTPDGYVAVVTMSNFQMYRHIMNPGWTLGWSWAKKEVIWSMVGSQTTEQGDCSKFKGNVPHCCKKTPTVVDLLPGVPYNLQFSNCCKGGVVAAWGQDPSSAVSSFQISVGQGGTSNKTVKLPKNFTLSAPGPGYTCGPAKVVPSTTFLTSDKRRKTQALMTWNVTCTYSQFLARKNPSCCVSLSSFYNETITPCPSCACGCQNKKNCVKGHSKFLDMVGLHTPKRDNEPLLQCTHHMCPIRVHWHVKVNYKDYWRVKIAVTNFNYRLNYSLWTLAVQHPNLNNVTQVFSFDYKPLLPYQSINDTGMFYGMKFFNDLLMEAGPSGNVQSEVLLQKNKETFTFNQGWAFPRRVYFNGEECMMPPPDTYPYLPNSSPINTLNFQALFTSFLLLLALC* 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g4654 431 PIRSF COBRA 1 431 IPR006918 GO:0010215|GO:0031225
Psa3g4654 431 PANTHER PROTEIN COBRA 6 429 IPR006918 GO:0010215|GO:0031225
Psa3g4654 431 Pfam COBRA-like protein 43 206 IPR006918 GO:0010215|GO:0031225
Psa3g4654 431 PANTHER COBRA-LIKE PROTEIN 6 429 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g4654 Psa-Chr3 432023118 432025614 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g4654 19 430 COBRA Gene Family AT3G29810 68.765 0.0 622
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g4654 - - gmx:100783410 825.854
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa3g4654 3 432023118 432025614 Psa3g4654 3 432023118 432025614 ECH