Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g4621 ATGAACAAGAACTCAAAAGAAGCTGATCAATTTCCATTGAAACAAGAGATTCATCAAAACTCAAATGATCAACAAGAAAAAGAAAAGGTTTCGTCATCATCGTTAAACTCGTTATCTTCGTCGCAATGGCCGAGATTGAAAGATCCAAGAATTGTTAGAGTATCAAGAGCCTTTGGTGGAAAAGATAGACATAGCAAAGTTTGCACTATAAGAGGATTAAGAGATAGAAGAATAAGACTTTCAGTTCCAACAGCTATTCAACTTTATGATCTTCAAGATAGGTTAGGGCTTAATCAACCTAGTAAAGTTGTTGATTGGTTACTTAATATTGCTAAACATGAGATTGATCAACTTCCACCTTTACCTAATTTTCCACCTCTAGGAGGGAATTTCAACTTCGGTTTTCCTTTTCCGACTAACGAATCCATCAACACCGACGCAAACACTTCTCAAACTCATCAACACTTGTTGAATTTCAATAGGAGTAACAATATTCACTGGGACGGTTCGTCTTCGAGCCATGAATCGAAAGAGGTTTCGAGAGAAATGGTTATGGAGAAAGGAAATTATTGGGTGAATAATAGAAGTACTACTCATGAAGATGAAAATGTTAACACAAAGCAAGGTAGTAACAATGTTGAAGTTCCTAGTGCAATTGTTTTACCTAATAGTAACAATTTCTTGCAAAGACCAAACCACCCTTCATTTCTTGGTTTGTTAAATACCATGCCATTTGGTTCTAGTTACAATTGGGGAGTTTCTTCTTCAAATGAAGGTTTTGCAAATCAAGAAGATGTTAATGCAATTGCATCTTTGCCACCAATGTTGTCTTTATCAACTGGAAATTCTTCTCAAATGTTGTTTGGAACATCACAATCATATTTTTCTTCAAATGTGAATGCAATGGAGATGGAACATCATCAACATCATCAACATCATCAACAACAACATCAAAGACAAATGAACAATCATTATCATCAAATGTTGAGTTCGTCGAGTTCGCAAAATCCGTTGAATAATTCTCTCAACAATCCATCTTTCAGTTTGGCCAAATTTCTACAAAGTTCATCAAATAAAGAACAAGGTTTCTCTCCAAAGTGA 1101 0.3515 MNKNSKEADQFPLKQEIHQNSNDQQEKEKVSSSSLNSLSSSQWPRLKDPRIVRVSRAFGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDRLGLNQPSKVVDWLLNIAKHEIDQLPPLPNFPPLGGNFNFGFPFPTNESINTDANTSQTHQHLLNFNRSNNIHWDGSSSSHESKEVSREMVMEKGNYWVNNRSTTHEDENVNTKQGSNNVEVPSAIVLPNSNNFLQRPNHPSFLGLLNTMPFGSSYNWGVSSSNEGFANQEDVNAIASLPPMLSLSTGNSSQMLFGTSQSYFSSNVNAMEMEHHQHHQHHQQQHQRQMNNHYHQMLSSSSSQNPLNNSLNNPSFSLAKFLQSSSNKEQGFSPK* 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g4621 366 MobiDBLite consensus disorder prediction 26 42 - -
Psa3g4621 366 PANTHER TRANSCRIPTION FACTOR TCP2-LIKE 1 356 - -
Psa3g4621 366 MobiDBLite consensus disorder prediction 305 337 - -
Psa3g4621 366 MobiDBLite consensus disorder prediction 1 42 - -
Psa3g4621 366 Pfam TCP family transcription factor 60 182 IPR017887 -
Psa3g4621 366 MobiDBLite consensus disorder prediction 320 337 - -
Psa3g4621 366 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 1 356 IPR005333 GO:0003700
Psa3g4621 366 ProSiteProfiles TCP domain profile. 60 118 IPR017887 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g4621 Psa-Chr3 428621740 428624025 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g4621 23 125 TCP Transcription Factor Family AT3G02150 64.602 4.37e-45 156
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Psa3g4621 TCP 1.4e-27 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g4621 - - var:108327895 274.633