Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g4619 ATGTCTGAAAAAGGTTTGAAGACTATGAAAGATGAAAAGAATGATTTGCAGAAGCAGATTGGGTGCATCACTGGATTTTTTCAGCTCTTTGATCGCCACCGTTTCATCACCGGCCAACGCAATAGCGGTTACATTCCGAATTCATCTTCTTCAGGTGTAAAGAATCAAAAGATTGCGAAAGAGAAGCAACAATTGTCTACCGAATCATCGATAACATCTGTGTCTTCATCATCTTGTTCATCTAGCATGTCGTCCATTGATTTCAATAGAATAATCAAGAATGAATCGTCATCGACCAAACAAATTCAAATTCCGAAAAAAACACATTCGAGCCAACGGTCACTTGATTTCTATGATGTTGTCAAAGATTCGATGCGTAGAGAAGGTAAAGGTTTATATGTGAAAACATTAACCAATGAAGAGAAAAAGGGTCAAGCTTATGCGTTGAAGAATCAACACATAGACTCTCCGAGGCCTATGCTATCGAAGAAATCTTTCGATGAAGCAGTTAAGGTTTCGAAAGAGCCGTTACATAATCTTTCGAAGTCGAGAAAACCACAATGGGACTCACCGCGACTCTCTTATGATGCAGTGAAATCTGCCACAGTGCATAAGGAACTTCCTAGGTTTTCCTTGGACAGCAAGCAAGGATCCGTTAGACGGATCAACGAAGGAAACAAGGCTCGCAACGTGTCGAATGGTTCACAAAAAGAATTAGAAACACCAAAAAGATCATCAAGTGTTGTTGCTAAATTGATGGGACTAGAAGGTCTCCCGGACTCGACACAAACTTGTCGGACTTCTATCTGCTCAACCGATCAAATAGAGCTTACCGCAAGAGCCAGCACAAATGATGTATACAAAAAACACCAAAGTTCGGCGCCCCCGAGCAATAGAAGGGATGATGGTTCACTCAAAAACGTGACACAACATTCGCGATTTGCTCTAGAATCGACGACTCCGTGGAGGCAACATGATGCAAACCAAAGTTCTTTGTTACATGATTCCTCAAAGGGAAGTGATTCTGAAACAAAAGCATCAAAGTCCTCGCTTTCTGTATATGGAGAAATCGAAAAAAGACTAGCGGAACTCGAGTTCAAAAAGTCCGGAAAGGATCTACGAGCCCTTAAACAGATTCTTGAAGCAATGCAGAGATTTACAGATTCATCATCTGACACTAGGAACAATAATACCAGTCTCAGTGAAAGTTCTAAAGTCCAAAGCCCGAGAATACGACAAAAGGACTCGGGATTCGTCACGGTTGAGTCGTCGTCGAATTCAATCCGTGATAGTAAATCGCCAATTGTCATCATGAAACCAACAAAAGTGACTAGAAAATCCAACAATACTCCTTCAGCTGATAAGAGTAATTACTTCAGAACTTCAAAATTGATGCAATCATCAAAATCTTCTCAAGACAGAAATGGAAAAAACACCATCAAGTCCGGTAACATAACGGTTACCGGGAGTCCAAGACTTCCGAAGAAGTTTGGATTCGAGAGGCGTTCTCCACCGACTAGTGCATCATCCGGTTCCCCGATTAACATAGGACAACGTAATAGGCAACTTATGGAGCTTTCGACTTCTTCTTCTTCGTGTTCAACACATAGACACGATTTCTCCATTTCGCAGGATAAAGATGAACATTTTAGTGAGACGAGTTTTCGGAGAAAATTTAAGCATCATGTTAATGTCATTTCTTCGGATTTCGACAGCAACAGAAGCTTGAACACTCTAGAAATTGTTCGGATCGATCAATCAGAGAATATCAATCAAATTGATGAATTTGAAGAGTTGAGGAATGAAAGCTCTAAGGCTGATAAAACTGTCACCGCGGAACAGCCGAGTCCTGTGTCTGTTCTTGATGCTGCATTCTATAAGGAAGATCCACCGTCTCCGGTGAATAAGATATCGAACATTTCAAGAAAATTAGGTGAAGCTTTATGCATCGATGTCGATATTGAGGAGAACTCAGTTGATCAAATTCTTCGTGAAATTGATTGGAACGATGAAAAAATCGTCAATTTCAACAACATCGAGAATCCTGATCACAAGTATATATCAGAAATCCTGATAGCTTCAGGTCTAATCACTGATCGAAACTCTAACGAGTTACTTCATTCACAAGGCACCTTGATTAACCCAAAGTTATTCATAGCGCTTGAACAAATGAAGACAAATATGTCGCGTTTCAATATTGAAGACAATGGGAAGAACATTTCCATAGGTAATAGTCCTGAGAAACTGCAAAGAAAACTCATATTCGATGTTGTCAACGACATTTTAGCAGAGAGAAAGCTAAAAGGGAAGAAGCTTTTCGAAGAGCTATGTATAGAAATAGACGAGTTACAACCTCGAAACATGAGTATCGGCTTTTTTCATGAGGATGAGAATTCGATAAGTCTATTGTCGAGAGATTTGAAGGATCGAAACACAGTTTGGACTAACCGTTGCAGCGAGAAACCGAATATCGTGTTGGACATCGAACGGTTGATCTTTAGAGACTTGATAACTGAAGTTTGTGAGAGATGA 2532 0.4017 MSEKGLKTMKDEKNDLQKQIGCITGFFQLFDRHRFITGQRNSGYIPNSSSSGVKNQKIAKEKQQLSTESSITSVSSSSCSSSMSSIDFNRIIKNESSSTKQIQIPKKTHSSQRSLDFYDVVKDSMRREGKGLYVKTLTNEEKKGQAYALKNQHIDSPRPMLSKKSFDEAVKVSKEPLHNLSKSRKPQWDSPRLSYDAVKSATVHKELPRFSLDSKQGSVRRINEGNKARNVSNGSQKELETPKRSSSVVAKLMGLEGLPDSTQTCRTSICSTDQIELTARASTNDVYKKHQSSAPPSNRRDDGSLKNVTQHSRFALESTTPWRQHDANQSSLLHDSSKGSDSETKASKSSLSVYGEIEKRLAELEFKKSGKDLRALKQILEAMQRFTDSSSDTRNNNTSLSESSKVQSPRIRQKDSGFVTVESSSNSIRDSKSPIVIMKPTKVTRKSNNTPSADKSNYFRTSKLMQSSKSSQDRNGKNTIKSGNITVTGSPRLPKKFGFERRSPPTSASSGSPINIGQRNRQLMELSTSSSSCSTHRHDFSISQDKDEHFSETSFRRKFKHHVNVISSDFDSNRSLNTLEIVRIDQSENINQIDEFEELRNESSKADKTVTAEQPSPVSVLDAAFYKEDPPSPVNKISNISRKLGEALCIDVDIEENSVDQILREIDWNDEKIVNFNNIENPDHKYISEILIASGLITDRNSNELLHSQGTLINPKLFIALEQMKTNMSRFNIEDNGKNISIGNSPEKLQRKLIFDVVNDILAERKLKGKKLFEELCIEIDELQPRNMSIGFFHEDENSISLLSRDLKDRNTVWTNRCSEKPNIVLDIERLIFRDLITEVCER* 844
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g4619 843 MobiDBLite consensus disorder prediction 212 246 - -
Psa3g4619 843 MobiDBLite consensus disorder prediction 387 517 - -
Psa3g4619 843 MobiDBLite consensus disorder prediction 281 351 - -
Psa3g4619 843 MobiDBLite consensus disorder prediction 442 489 - -
Psa3g4619 843 MobiDBLite consensus disorder prediction 387 432 - -
Psa3g4619 843 MobiDBLite consensus disorder prediction 503 517 - -
Psa3g4619 843 PANTHER LONGIFOLIA PROTEIN 1 453 - -
Psa3g4619 843 PANTHER LONGIFOLIA PROTEIN 452 659 - -
Psa3g4619 843 PANTHER LONGIFOLIA PROTEIN 660 841 - -
Psa3g4619 843 PANTHER LONGIFOLIA PROTEIN 660 841 IPR033334 GO:0051513
Psa3g4619 843 PANTHER LONGIFOLIA PROTEIN 1 453 IPR033334 GO:0051513
Psa3g4619 843 PANTHER LONGIFOLIA PROTEIN 452 659 IPR033334 GO:0051513
Psa3g4619 843 MobiDBLite consensus disorder prediction 216 243 - -
Psa3g4619 843 Pfam Domain of unknown function (DUF4378) 683 839 IPR025486 -
Psa3g4619 843 MobiDBLite consensus disorder prediction 41 74 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g4619 Psa-Chr3 428401944 428406060 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g4619 189 841 TRM (TON1 Recruiting Motif) Superfamily AT5G15580 32.487 1.24e-61 223
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g4619 - - cam:101511032 902.508