Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g4617 ATGACAAAAATCATAGAAATTTTCAATGTATCACCATCTTCACCACAAGAACTTCCTTCAGAAGCTTCACTTCCTCTTACATTCTTTGACATACTATGGTTAAGATTACCACCTGTTCAAAGAATTTTCTTTTATGAATTTCCACACCAACCTTCACTTTTCTTCAACACTTTTCTTCCTAAACTCAAACAATCTCTTTCTCTTGCACTTTTCCACTTTTATCCTCTTTTGGGTCATCTCATTTGGCCTATTGATTCTCACAAACCAATCATCAAGTACACCAAAGGCAACACTCTTTCACTCACACTTGCTGAATCTGATGCTGATTTCAATCTTCTATCTGGTAATAATTTCTGTGAAGCTACACAAGTTCATCATCTTTTATCTAGTTTGAGTATTTCACATGACCAAGCTTCTGTTCTTGCTCTTCAAGTTACTCTTTTTCCAAACACTGGTTTTTCAATTGGTGTCACTTCACATCATGCTGTTTTAGATGGTAAAAGTTCAACTTCTTTTATCAAATCTTGGGCTTATCTATGTAGAAGCCTTGAAATTGGTGATTCTGAACCAAAATCAAAATCAGAATCAGAATCACCCCTTTTGTTGCCACATGAATTTTATCCTTTTTATGATAGAAAAGTAATCAAGGATCCTAATGGATTTGAGGCAAAATATTTGAGTGATTGGTTAAAGCATGGTGGAACAAACAACAGAAGCTTAAAGGTTTGGGATCTTGAAGTTCCAGAAGACTCAGTTAGAGGGTTATTTCAATTATCTCGTTTGGATATTGAAAAACTTAAACAATTTATAGTGTCAAGACAAAAGGGTCTTAGGAATGAGAATAAAAATCTTCATTTGTCAACTTTTGTGGTATCTCTTGCATATGCATGTATATGCAGAGTGAAAGCAGACGAAAGCGAGAACAAAACTGTTAAAATTGCTTTCAGTGTCGATTGCAGGAACCGTTTAACTTGGCCTATTCCTGCAACATATTTTGGAAATTGCATTGGAGCAAGACTTGCAGCTGTTGGAACAAGTGAGTTATTGGGAGAAAATGGACTAACTGTGGCTGTTAAAGTTTTAAGTGAAGCTTTGGAAACTCTAAAAGATGGAGTGTTAAAAGGAGCTGAAAATTGGTCTTCTTGGTTACTTGATGGTGTTGTCAATGCTGATGTTAAAACATATGGTACTGCTGGTTCACCTAAATTTGAGGTTTATAGCACTGATTTCGGTTGCGGAAAACCAAAGAAAGTTGAAGTGGTTTCTATTGATAGAACTGGTGCGATTTCTATTTCTGATTGTAGAAATGGTGATGGTGTTGAGATAGGTTTTGTGTCTAAGAAAAAGGCAATGGAAACTTTTGCTTCTCTCTTTGTCAAAGGGATTGCATCTTGA 1395 0.3563 MTKIIEIFNVSPSSPQELPSEASLPLTFFDILWLRLPPVQRIFFYEFPHQPSLFFNTFLPKLKQSLSLALFHFYPLLGHLIWPIDSHKPIIKYTKGNTLSLTLAESDADFNLLSGNNFCEATQVHHLLSSLSISHDQASVLALQVTLFPNTGFSIGVTSHHAVLDGKSSTSFIKSWAYLCRSLEIGDSEPKSKSESESPLLLPHEFYPFYDRKVIKDPNGFEAKYLSDWLKHGGTNNRSLKVWDLEVPEDSVRGLFQLSRLDIEKLKQFIVSRQKGLRNENKNLHLSTFVVSLAYACICRVKADESENKTVKIAFSVDCRNRLTWPIPATYFGNCIGARLAAVGTSELLGENGLTVAVKVLSEALETLKDGVLKGAENWSSWLLDGVVNADVKTYGTAGSPKFEVYSTDFGCGKPKKVEVVSIDRTGAISISDCRNGDGVEIGFVSKKKAMETFASLFVKGIAS* 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g4617 464 Gene3D - 1 240 IPR023213 -
Psa3g4617 464 Gene3D - 246 463 IPR023213 -
Psa3g4617 464 PANTHER ACYLTRANSFERASE, PUTATIVE-RELATED 3 463 - -
Psa3g4617 464 Pfam Transferase family 10 456 - -
Psa3g4617 464 PANTHER - 3 463 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g4617 Psa-Chr3 428057534 428059260 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g4617 49 415 Monolignol Biosynthesis Gene Families AT5G48930 23.393 4.03e-15 75.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g4617 - - mtr:MTR_7g014230 714.146