Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g4611 ATGGAACGTGCATTTGCTAACCTAAATAAAATATTTGTAGCGTGTTGCAACACTTTCTCTAAAATAAGAATTAAACCTGCATTTTCCTATGTGACAGATCACTTCTATATTATATACTATATATTCAGTTTCATTCTAGTCTTTCATTATAGAGAAATCAATAATACTTCCTTCGAGCTTTCCATGTCTTCCAACAAGAACAACACTATAATCCATCAACAAATCAAAGTTGTTCCTCCATCATCAACCCAAACAACAACATCAACAATCCCTCTCACTTTCCTTGACATTGTTTGGCTAAGGTTCCATCCAAATGAGAGAATCTACTTTTACGCCCTCCATGATTCACACTCCCACCCTTCTTTCTTTTTCCAACATATTGTTCCAAATCTCAAATCTTCACTCTCTTTAACTCTCCAACACTTTCTCCCTTTAGCTGGTAAAATCGTTTGGCCTTCGGATTCTTCAAAACCATTCATGCAGTTCAATCCCAATGACAATGATAATGGGGTTTCCTTGCTCATAGCAGAGTCTGATGCTGATTTCCAGCATGTCATTGGAAACTCACCCCATGAAGCTTCTTTGTCTCGTTCTTTTATTCCCAACTTGGAATCATCACATTTGTGTGCTTCTGTTATCTCAATCCAAATCACTCTTTTCCCAAGCTCTGGCTTCAGCATAGGAATCACTACACACCATGCTGTTTTTGATGGAAAATCTTTATCCATGTTCGTCAAAGCTTGGGCTTATCTAAGCAAAAAAAACATTGAAACTGGAGAATCACCACCTTTGTTGCCAGAGTTAGAGCCTTTATTCAACAGAGATATCATCAAAGGCACGACAGAAAATAACTCAATCGAGATCTTATCCAAGTTATTCCCAGCTGAAAACGGAAATGAAAGAAGCCTAAAGATTTTTCCTTCTGAACCAAAACTGGAAGAATCTGTTCGTGCTACATTCAAGCTCACGCGTGAAGATTTGGATAAAATAAAGCAAAAGGTGTTATCGAAATGGGAAATAATGGATACAAATGAATCAAAGCCAAAGACTCTATCTTCTTTTATTCTCACTTGTGCTTATTCATTTGTTTGTATTGCAAAAGCTATTCATGAAGTTGAAAAAGAGAAAGAAAAGTTTGCTTTGGCTTTTGCAGTAGACTGTAGAGCAAGGTTGGAGCTACCAATACCAGATAACTATTTTGGAAACTGTGTACCAGGGTATTTTATCGATACAAATCCATTGGATTTCATAAAAGAAGATGGTGTGTTTTTAGTTGCTAAGTGTATTTTTGAGAAAATAAAGATGATAAAAGAAAAGGGTGTTTTAGAAGAAAATATGGTTGATGTGTTTCATAAATACGGTTCTTTATTTAAGGAAGGATTTGTAACTTTTGGAGTGGCTGGATCTAATAGATTTGGTGTTTATGAGAATGATTTTGGTTATGGAAGGCCAGAAAAGGTGGAGATAGTGTCCATAGATAAAGGTTTATCAATTGGTTTTGGAGATAGCAAAGATGGCAATGGTGGAGTTGAAATTGGCCTTGTTCTTAAGAAACATGTAATGGATCTCTTTAGCACTTTGTTTCTTGAAGGAATATGTGGTAATTCCAAGTTGTTTCATCAATACTCAAAAGAGTAA 1638 0.3584 MERAFANLNKIFVACCNTFSKIRIKPAFSYVTDHFYIIYYIFSFILVFHYREINNTSFELSMSSNKNNTIIHQQIKVVPPSSTQTTTSTIPLTFLDIVWLRFHPNERIYFYALHDSHSHPSFFFQHIVPNLKSSLSLTLQHFLPLAGKIVWPSDSSKPFMQFNPNDNDNGVSLLIAESDADFQHVIGNSPHEASLSRSFIPNLESSHLCASVISIQITLFPSSGFSIGITTHHAVFDGKSLSMFVKAWAYLSKKNIETGESPPLLPELEPLFNRDIIKGTTENNSIEILSKLFPAENGNERSLKIFPSEPKLEESVRATFKLTREDLDKIKQKVLSKWEIMDTNESKPKTLSSFILTCAYSFVCIAKAIHEVEKEKEKFALAFAVDCRARLELPIPDNYFGNCVPGYFIDTNPLDFIKEDGVFLVAKCIFEKIKMIKEKGVLEENMVDVFHKYGSLFKEGFVTFGVAGSNRFGVYENDFGYGRPEKVEIVSIDKGLSIGFGDSKDGNGGVEIGLVLKKHVMDLFSTLFLEGICGNSKLFHQYSKE* 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g4611 545 Gene3D - 70 293 IPR023213 -
Psa3g4611 545 Pfam Transferase family 76 525 - -
Psa3g4611 545 Gene3D - 312 533 IPR023213 -
Psa3g4611 545 PANTHER - 66 534 - -
Psa3g4611 545 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 66 534 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g4611 Psa-Chr3 427864655 427866606 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g4611 82 530 Monolignol Biosynthesis Gene Families AT5G48930 23.355 6.46e-17 81.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g4611 - - gmx:100815354 529.25