Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g4609 ATGGCTTCCAACAAAAACAACATTAAGATCCATCAACACATCAAAGTTGTTCCTCCATCATCATCATCACAAACAACAACAACAACAGTCCCTCTCACTTTCTTTAACATAATTTGGCTAAGGTTGCATCCAGTAGAGCGAATCTTCTTCTATGCCCTTCCAAATTCACAATCAAGCCCCTCTTTCTTCTTCCAACAAATAGTTCCAAATCTCAAATCTTCACTCTCTTTAACTCTCCAACACTTTCTCCCTTTAGCCGGTAAAATCGTTTGGCCTTCGGATTCTTCAAAACCATTCATGCAGTTCAATCCCAATGACAATGACAATGGGGTTTCCTTGTTCATAGCAGAGTCTGATGCTGATTTCAATCATGTCATTGGAAACTCACCCCATGAAGCTTCTTTGTCTCGTTCTTTTATTCCCAACTTGGAATCATCACATTTGTGTGCTTCTGTTATCTCACTCCAAATCACTCTTTTCCCAAGCCGTGGCTTCAGCTTAGGAATCGCTCCACACCATGCTGTTTTTGATGGAAAATCTTCATCCATGTTCATCAAAGCTTGGGCTTATCTATGCAAAAAAACCATTGAAACTGGAGAATCACCACCTTTGTTGCCAGAGTTAGAGCCTTTATTCAACAGAGATATCATCAAAGACACGACTGAAAATAACTCAGTCGAGATCTTATCCAAGTTATTCCCAGCTGAAAACGGAAATGAAAGAAGCCTAAAGATTTTTCCTTCTGAACCAAAACTGGAAGAATCTGTTCGTGCTACATTCAAACTCACGCGTGAAGATTTGGATAAAATAAAGCAAAGGGTGTTATCGAAATGGGAAATAATAGATACAAATGAATCAAAGCCAAAGCCAGCGACTCTTTCTTCTTTTATTCTCACTTGTGCTTATTCACTTGTTTGTTTTGCAAAAGCTATTCATGAAGTTGAAAAAGAGAAAGAAAAGTTTGCTTTTCTTTTTGCAGTAGATTGTAGAGCAAGGTTGGAACCACCAATACCAGATAACTATTTTGGAAACTGTATATCGGGCCATTTTATTGATAAAAATCCATTGGATTTCATAAAAGAAGATGGTGTGTTTTTAGTTGCTAAGTGTATTTTCGAGAAAATAAAGATGATAAAAGAAAAGGGTGTTTCAGAAGGAAATGCTTTTGATGTGTTTGATACACTGAGTTCCTTAAACAAGGAAGGATATGAAATCTTAGGAGTGTCCGGGTCTAATAGATTTGGTCTTTATGAGAATGATTTTGGTTATGGAAGGCCAGAAAAAGTGGAGATAGTGGCCATAGATAGAGGCTTATCAATTGGTTTTGGAGATAGCAAAGATGGCAATGGTGGAGTTGAAATTGGCCTTGTTCTAAAAAAACATGTAATGGATCTCTTTAGCACTTTGTTCCTTGAAGGACTTCAGATATTATCCTCTAACGACGAGTCACTTCTCATATACAAATTAAATATTAAAAAATCCATTAAAACAAAACAAAGGAACAACAGAGGCTGA 1515 0.3703 MASNKNNIKIHQHIKVVPPSSSSQTTTTTVPLTFFNIIWLRLHPVERIFFYALPNSQSSPSFFFQQIVPNLKSSLSLTLQHFLPLAGKIVWPSDSSKPFMQFNPNDNDNGVSLFIAESDADFNHVIGNSPHEASLSRSFIPNLESSHLCASVISLQITLFPSRGFSLGIAPHHAVFDGKSSSMFIKAWAYLCKKTIETGESPPLLPELEPLFNRDIIKDTTENNSVEILSKLFPAENGNERSLKIFPSEPKLEESVRATFKLTREDLDKIKQRVLSKWEIIDTNESKPKPATLSSFILTCAYSLVCFAKAIHEVEKEKEKFAFLFAVDCRARLEPPIPDNYFGNCISGHFIDKNPLDFIKEDGVFLVAKCIFEKIKMIKEKGVSEGNAFDVFDTLSSLNKEGYEILGVSGSNRFGLYENDFGYGRPEKVEIVAIDRGLSIGFGDSKDGNGGVEIGLVLKKHVMDLFSTLFLEGLQILSSNDESLLIYKLNIKKSIKTKQRNNRG* 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g4609 504 Pfam Transferase family 16 467 - -
Psa3g4609 504 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 5 475 - -
Psa3g4609 504 PANTHER - 5 475 - -
Psa3g4609 504 Gene3D - 252 477 IPR023213 -
Psa3g4609 504 Gene3D - 3 234 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g4609 Psa-Chr3 427858551 427860065 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g4609 8 472 Monolignol Biosynthesis Gene Families AT5G48930 23.319 2.02e-17 82.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g4609 - - gmx:100815354 551.592