Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g4608 ATGGCTTCCAACAACATTAAAATTCACAAACATTTCAAAGTTGTTCCAACATCATCAACTCAAATAACAACGCCTCTCACTTACTTTGATATATTTTGGCTAAGGTTTCATCCAGTAGAACGTGTTTTCTTTTACACCCTCCCAATTTCACAATCACACCCCTCTTTCTTCTTCCAAAAGCTTGTTCCAAAGTTCAAATCTTCACTGTCTTTAACCCTACAACACTTTCTCCCTTTAGCTGGTAAGATCGTTTGGCCTTCGGATTCTTCAATACCATTCATCCAATTCAATCCCAATGATAAGGATGATGGAGTTTCATTGCTCATTGCAGAATCTGATTTGGATTTCAACCATGTCATTGAAAACTCACCACAAGAAGCTTCCTTGTCTCGTTCTCTTATACCCTATTTAGAATCTACTGATTGTTTCGCTTCTGTTATCTCCATTCAGATCACCCTTTTTCCAAAAAGTGGTTTTTCCATTGGTATCAGCACACACCATGCAGTTCTTGATGGAAAATCTTCAACAACGTTCATCAAAGCTTGGGCTTATCTATGCAACAAAATGATTAAAACCGAAGAAGAATCACCAACTTTGTTACAAGAGTTAGAGCCTTTCTTCAACAGAGATATCATCAAAGACACAAATGAACTCGAAGTTACACTAACAAATAATTGGATGGAGATGATGACCAAGTTGTTTCCAAATGATAAAGGAAATGAAAGATGCTTGAAGATTCTACCTTTTGAACCAAAACTCAAAGACTGTGTTCGTGCTACGTTCAAGCTCACGCGTGAAGATTTGAACAAGTTGAACAAAAGGGTGTTATCTACCTGGGAAATATTCAATAAAAATGAATCAAAGCCAACGAATTTATCATCGTTTGTTCTCACATGTGCTTATTCGCTTGTTTGTATTGCAAAAGCTTTTCAACGAGTTGAAAAGGAGAAACAGAAGTTTTCTTTTGCTTTCACTATAGATTGCAGATCAAGATTAGAACCACCAATACCAAATAACTATTTCGGAAACTGCGTATTAGGGCACTTCATTGATACACAACCATTGGATTTCGTAAAAGAAGATAGTTTGAATTTAGTTTCAAAAAGTATTTATGATATAGTAAAGATGATAAAAGAAAAGGGTGTTTTTGAAGGAGTTAATGATGTGTTTGCTAAATATACTTGTTTGGCAAGTGAAGGAGTTGAAATTTTTGGAGTGGCAGGGTCTAATAGATTTGGTGTTTATGAGACTGATTTTGGTTGGGGAAGGCCGGAAAAGGTGGAGATAGTATCGATCGATAGAGGTTTAACGATTGGTTTAGCAGATAGCAAAGATGGCAATGGTGGCATTGAAGTTGGGCTTGTTCTTAATGAAGATGTAATGGATCACTTTAGAAATTTGTTTCTTGAAGGACTAAGCATTGATTGA 1428 0.3613 MASNNIKIHKHFKVVPTSSTQITTPLTYFDIFWLRFHPVERVFFYTLPISQSHPSFFFQKLVPKFKSSLSLTLQHFLPLAGKIVWPSDSSIPFIQFNPNDKDDGVSLLIAESDLDFNHVIENSPQEASLSRSLIPYLESTDCFASVISIQITLFPKSGFSIGISTHHAVLDGKSSTTFIKAWAYLCNKMIKTEEESPTLLQELEPFFNRDIIKDTNELEVTLTNNWMEMMTKLFPNDKGNERCLKILPFEPKLKDCVRATFKLTREDLNKLNKRVLSTWEIFNKNESKPTNLSSFVLTCAYSLVCIAKAFQRVEKEKQKFSFAFTIDCRSRLEPPIPNNYFGNCVLGHFIDTQPLDFVKEDSLNLVSKSIYDIVKMIKEKGVFEGVNDVFAKYTCLASEGVEIFGVAGSNRFGVYETDFGWGRPEKVEIVSIDRGLTIGLADSKDGNGGIEVGLVLNEDVMDHFRNLFLEGLSID* 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g4608 475 Gene3D - 6 237 IPR023213 -
Psa3g4608 475 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 1 474 - -
Psa3g4608 475 Gene3D - 253 475 IPR023213 -
Psa3g4608 475 Pfam Transferase family 14 466 - -
Psa3g4608 475 PANTHER - 1 474 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g4608 Psa-Chr3 427713345 427715811 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g4608 6 470 Monolignol Biosynthesis Gene Families AT5G48930 24.174 2.15e-19 88.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g4608 - - gmx:100814826 610.142