Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g4607 ATGGATTCCAACAACATTAAAATCCATGAACACACCAAAGTTGTTCCTCCATCATCATCAACTCTAGTAAAAACAATAACTCCTCTCACTTTCTTTGACATATTTTGGCTAAAATTCCACCCTGTAGAACGTGTTTTCTTTTACACCCTCCCAAATTCACAATCACACCCCTCTTTCTTCTTCCAAGAAATTGTTCCAAATCTCAAATCTTCACTCTCTTTAACCCTCCAACATTTTCTCCCTTTAGCCGGTAAAATCCTTTGGCCTTCTGATTCTTCAAAACCATTCATCAAGTTCAATCCCAATGAAGATGATGGAGTTTCATTTCTCATTGCAGAATCTGAGTTAGATTTCAACCTTGTCATTGAAAACTCGCCACAAGAAGCTTCTTTGTCTCGATCTTTAATACCGCTTTTAGAATCAACAGATTCTTTTGCTTCTATTATCTCAATCCAGATAACCCTTTTTCCAAAAAATGGTTTTTCTCTTGGCATCACCACACACCATGCTGTTCTTGATGGAAAATCTACAACCATGTTCATGAAAGCGTGGGCTTATCTATGCAACAAAACCATTGAAACCCTAGATGAATCACCAACTTTGTTACCAAAGTTAGATCCTTTATTCAACAGGGAAATCATCAGAGACCCAAATGAACTTGCTTTAAACTTCACAAATATCTGGATTCATCACATGACACAGAAGTTCCCAAATGAAAAACTAAACAGTTTGGAGATTTTTCCTTCTGAACCAAAACTCAAAGACTATGTTCGTGCTACGTTCAAGCTCACGCGCGAAGATTTGGATAAAATAAAGCAAAGGGTGTTATCCAAATGGGAAATAATGGATACAAATGAATCAAAATCAAAGCCAGAGACTCTATCTTCTTTTATCCTCACTTGTGCTTATTTGCATGTTACTATTGCAAAAGCTATGAATGGAGTTGAAAAGGAGAAAGAGAGGTTCGCTTTTGTTTTCTCGGTAGATTGTAGAGCAAGGTTAGAACCACCAATACCAAATAACTATTTTGGTAACTGTGTTTGGTTGCAATTCCCTGATACACAACCATTGGATTTCATCAAAGAAGATGGTGTTCTCTTAGTTGCTAAGTGTATTCATGAGAAAATAAAGATGATAGATGAAAAGGGTGTTCTTGAAGGAGCTAAAGATTGCATTAATAAACTTATTTCTTTACGAATAGAAGGATTTGAAATTATGGGAGTGGCAGGGTCTAATAGATTTGGTGTTTATGAGACTGATTTTGGATGGGGAAGGCCGGAAAAGGTGGAGATAGTATCAATCGATAGAGGTTTAACAATTAGTTTGGCAGAAAGCAAAGATGGGAATGGTGGAATTGAAGTTGGAGTAGTTCTTAAAAAAGATGAAATGAATCTCTTTAGCTCTTTGTTTTTTTTTGAAGGACTTTGA 1428 0.3627 MDSNNIKIHEHTKVVPPSSSTLVKTITPLTFFDIFWLKFHPVERVFFYTLPNSQSHPSFFFQEIVPNLKSSLSLTLQHFLPLAGKILWPSDSSKPFIKFNPNEDDGVSFLIAESELDFNLVIENSPQEASLSRSLIPLLESTDSFASIISIQITLFPKNGFSLGITTHHAVLDGKSTTMFMKAWAYLCNKTIETLDESPTLLPKLDPLFNREIIRDPNELALNFTNIWIHHMTQKFPNEKLNSLEIFPSEPKLKDYVRATFKLTREDLDKIKQRVLSKWEIMDTNESKSKPETLSSFILTCAYLHVTIAKAMNGVEKEKERFAFVFSVDCRARLEPPIPNNYFGNCVWLQFPDTQPLDFIKEDGVLLVAKCIHEKIKMIDEKGVLEGAKDCINKLISLRIEGFEIMGVAGSNRFGVYETDFGWGRPEKVEIVSIDRGLTISLAESKDGNGGIEVGVVLKKDEMNLFSSLFFFEGL* 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g4607 475 Pfam Transferase family 12 468 - -
Psa3g4607 475 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 1 474 - -
Psa3g4607 475 Gene3D - 253 473 IPR023213 -
Psa3g4607 475 Gene3D - 5 239 IPR023213 -
Psa3g4607 475 PANTHER - 1 474 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g4607 Psa-Chr3 427692403 427694100 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g4607 20 471 Monolignol Biosynthesis Gene Families AT5G48930 26.216 3.53e-25 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g4607 - - mtr:MTR_7g014620 575.474