Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g4606 ATGATGTCTTCCAACAACAACATTAAAATCCACGAACACTTCAAAGTTGTTCCTCCATCTTCATCCCAAACAACAACAATCTCTCTCACTTACTTTGATATATTTTGGCTAAGGTTCCATCCAGTAGAACGTGTTTTCTTCTACACCCTCCCAAATTCACAATCACACCCCTCTTTCTTCTTTCAAAAAATTGTTCCAAATCTCAAATCTTCACTCTCTTTAACCCTTCAACACTTTCTCCCTTTAGCTGGTAAAGTCGTTTGGCCTTCGGATTCTTCAAAACCATTCATCCAATTCAATCCCAATGATAATGATGATGCAGTTTCATTGCTCATTGCAGAATCTGATTTGGATTTCAACCATGTCATTGAAAACTCACCACAAGAAGCTTCCTTGTCTCGTTCTCTTATACCCTATTTAGAATCAACAGGTTCTTTTGCTTCTGTTATCTCAATTCAAATAACCCTTTTTCCAAAAAGTGGTTTTTCTATTGGAATCACCACACACCATGCAGTTCTAGATGGAAAATCTTCAACAATGTTCATCAAAGCTTGGGCTTATCTATGCAACAAAATGATTAAAACCGAAGAAGAATCACCAACTTTGTTACCAGAGTTAATGCCTTTATTCAACAGGGAAATCATCAAAGACCCAAATGAACTTCAAGCAAAATTCACAGAGAATTTGAATGAAATGGCAACCAAGATGTTCCCAAATGAAAAACCAAACCAACGAAGCTTGAAGATATTCGCTTTCGAACCAAAACTCGACTCTCTTCGTGCTACGTTCAAGCTCACGCGTGAAGATTTGGATAAGATAAAGCAAAGGGTGTTATCGAAATGGGAAATAATGGATACAAATGAATCAAAGCCGAAGCCAGAGACTCTATCTTCTTTTATTCTCACTTGTGCTTATTCACTTGTTTGTATTGCAAAAGCTATTCATGAGGTAGAAAAAGAGAAAGAGAAGTTTGGTTTTGTTTTCACAGTAGATTGCAGAGGAAGGTTAGAGCCACCAATACCAAAAAACTATTTCGGAAACTGTGTTTGGGGGATTATCATTGATACACAGCCATTGGATTTCATAAAAGAAGATGGTGATTTTTTAGTTGCAAAGAGCATGCATGAGAAAATAAAGATGGTGAATCAAAATGGGTTTGATAAATTTACTCCTATGCCAAATGAAGGGATCGAAGTAATTGGATTGGCGGGTTCTAATAGATTTGGTGTTTATGAGATTGATTTTGGTTGGGGAAGGCCGGAAAAGGTGGAGATAGTGTCGATTGATAGAGGTTTAACAATTGGTTTGGCAGAAAGCAAAGATGGGAATGGTGGAGTTGAAGTTGGAGTAGTTCTTAAGAAAGATGTAATGGATCTCTTTAGAAATTTGTTTCTTGAAGGACTAGGTAGGAATTAG 1416 0.3701 MMSSNNNIKIHEHFKVVPPSSSQTTTISLTYFDIFWLRFHPVERVFFYTLPNSQSHPSFFFQKIVPNLKSSLSLTLQHFLPLAGKVVWPSDSSKPFIQFNPNDNDDAVSLLIAESDLDFNHVIENSPQEASLSRSLIPYLESTGSFASVISIQITLFPKSGFSIGITTHHAVLDGKSSTMFIKAWAYLCNKMIKTEEESPTLLPELMPLFNREIIKDPNELQAKFTENLNEMATKMFPNEKPNQRSLKIFAFEPKLDSLRATFKLTREDLDKIKQRVLSKWEIMDTNESKPKPETLSSFILTCAYSLVCIAKAIHEVEKEKEKFGFVFTVDCRGRLEPPIPKNYFGNCVWGIIIDTQPLDFIKEDGDFLVAKSMHEKIKMVNQNGFDKFTPMPNEGIEVIGLAGSNRFGVYEIDFGWGRPEKVEIVSIDRGLTIGLAESKDGNGGVEVGVVLKKDVMDLFRNLFLEGLGRN* 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g4606 471 Coils Coil 256 276 - -
Psa3g4606 471 Gene3D - 256 469 IPR023213 -
Psa3g4606 471 PANTHER - 3 470 - -
Psa3g4606 471 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 3 470 - -
Psa3g4606 471 Pfam Transferase family 9 462 - -
Psa3g4606 471 Gene3D - 8 240 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g4606 Psa-Chr3 427650773 427653098 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g4606 8 466 Monolignol Biosynthesis Gene Families AT5G48930 23.602 5.83e-19 87.0