Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g4596 ATGGCTGTAGAGGAATCTGAGAAAATGATTCCGGAGTTAGAAAGAGAGGAGGATTTGATTGCGGCAGCTCGGCATATTGTGGCGGCTCTAGGTTTGAATAAGAATCTTACTAGTGATGCTAAGAAGATTCTGGCTGATCTTGGATCGAAGTTGTCTTCGATGAATATTACGAATGAGAAGGAGGAAAGGAAGATAGGGAAAAACGAGGATGATAACGATGAGGGAGAGGAGGTGGATGATGAGGAGGAGGAAGAAGAGGGTGCCGGTGTTATTGAAAAACGACTTGGTTTGATCCAAGAGAAGATAATGAGATGGGAGGAAGATGAGTCGATGATTTGGGATTCGGGACCGGAGGAAGCGTCTGAGTATCTGAACGCGGCTAATGAAGCGCGGTTATTGATCGATAAGTTGGAGAGTATGCATTTGAGTAAAGAGGATGAAGAGTATAAGTTTTTGCAAAGGGCTCATAGTGTTCTTCAGACGGCTATGACGCGGCTCGAAGAAGAGTTTAGCAATTTGCTTATCCAGAATAGGCAACCTTTTGAACCTGAGTATGTGTCTTTTCGGTCGAGCGAGGAAGATGGTGCCGATGGGAATTCATTTGTCTCTTTAGGTGATGATTCCTTTGAGGAATCACTTCGAAGAGATAGTGTTAGCCGAGCCGCCGAGGAGCATGTTATCAATTTAGTTCGTCCGGATATAATCCCCGATCTCAGGTGTATTGCGAACTTGCTTTTTGCTTCGAATTATGCGAAGGAATGTTCGCAAGTTTATACCATTGTTCGGAGAGATGCTTTAGACGAGTGTTTGTTCATTCTTGAAATGGAAAGGCTTAGTATCGAAGATGTCTTGAAAATGGAATGGAATACTTTGAATTCGAAGATCAAAAGATGGATTTGGGCCGTGAAAATCTTTGTTCGGGTTTATCTCGCGAGTGAAAGGTGGCTTAGCGACCAGATTTTCGGAGAAGGCGAGCCTGCTAGTCAAGTTTCTTTTGTCGATGTATCGAAAACTTCGATTTTGCAGCTTCTGAATTTCGGCGAAGCGATGTCTATCGGTCCTCACAAACCCGAAAAATTGTTTCGAATTCTCAACATGTATGAAGTTCTCGCAGGCCTTATGCCAGACATCGATGCTTTGTATCCGGACGAGATCGGTTCCTCGGTTAAATTTGAATGTCACGAGGTTCTGGACAGATTGGGAGATTGCGTGAGGATAACGTTTCTCGAATTCAAAAGTGTTGTCGATTCCAATCCGTCAACAACACCTTTAGTTGGTGGTGGAATACATCCTTTGGCGAGGTACGTTATGAATTATCTTCGGGCTCTCGCCGATTACAGCGAAGCGCTAAATCATCTTCTAAAAGACCAAGAAGAAGAGGATGCCATTTCTTCGTCGCCTGACACGAGTCCAGGTACCGAAGAAGATAACCGAAGCCAAGGCTCTCCCGGTAGATTTCCATCGATGGCGCGACAATTCCTATCGTTCGCTTCCGTCTTGGAAAACAATCTCGAAGAGAAATCGAAGTTATACAAAGAAACTTCATTGCAGCACTTATTCTTAATGAACAACATCCATTATATGGCTGAAAAGGTTAAAGGACCTGAACTTAGGATCATATTCGGCGACGAATGGATTCGAAAACACAACTGGAAGTTTCAGCAGCACGCGATGAAATACGAGAGAGCCTCTTGGAGTTCAATTCTCAGCTTACTTAAGGACGAAGGAATTCACGCCCCCGGTTCAAATTCCGTCTCGAAAACTCTTCTGAAAGAGAAGCTACGAAGCTTCTACCTCGGATTCGAGGATATTTACAGGGTCCAAACAGGTTGGTCGATCCCGGATGTTCAGCTTCGCGAAGATCTGCGGATTTCGATATCGGTAAACTTGATTCAAGCTTATAGGACATTTGTTGGAAGGCATAGTAGTCACATTAGTGACAGAAATATTAGATACACTGCTGATGATTTAGAGAATTATCTTTTGGATTTCTTTGAAAATTCTCAAAAGTTGTTGCAAAATCCTCTTAGGAGGTGA 2037 0.4345 MAVEESEKMIPELEREEDLIAAARHIVAALGLNKNLTSDAKKILADLGSKLSSMNITNEKEERKIGKNEDDNDEGEEVDDEEEEEEGAGVIEKRLGLIQEKIMRWEEDESMIWDSGPEEASEYLNAANEARLLIDKLESMHLSKEDEEYKFLQRAHSVLQTAMTRLEEEFSNLLIQNRQPFEPEYVSFRSSEEDGADGNSFVSLGDDSFEESLRRDSVSRAAEEHVINLVRPDIIPDLRCIANLLFASNYAKECSQVYTIVRRDALDECLFILEMERLSIEDVLKMEWNTLNSKIKRWIWAVKIFVRVYLASERWLSDQIFGEGEPASQVSFVDVSKTSILQLLNFGEAMSIGPHKPEKLFRILNMYEVLAGLMPDIDALYPDEIGSSVKFECHEVLDRLGDCVRITFLEFKSVVDSNPSTTPLVGGGIHPLARYVMNYLRALADYSEALNHLLKDQEEEDAISSSPDTSPGTEEDNRSQGSPGRFPSMARQFLSFASVLENNLEEKSKLYKETSLQHLFLMNNIHYMAEKVKGPELRIIFGDEWIRKHNWKFQQHAMKYERASWSSILSLLKDEGIHAPGSNSVSKTLLKEKLRSFYLGFEDIYRVQTGWSIPDVQLREDLRISISVNLIQAYRTFVGRHSSHISDRNIRYTADDLENYLLDFFENSQKLLQNPLRR* 679
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g4596 678 MobiDBLite consensus disorder prediction 56 71 - -
Psa3g4596 678 Pfam Exo70 exocyst complex subunit 296 662 IPR046364 GO:0000145|GO:0005546|GO:0006887
Psa3g4596 678 MobiDBLite consensus disorder prediction 72 87 - -
Psa3g4596 678 Gene3D Exocyst complex component Exo70 100 673 - -
Psa3g4596 678 MobiDBLite consensus disorder prediction 55 90 - -
Psa3g4596 678 PANTHER EXOCYST COMPLEX PROTEIN EXO70 22 672 IPR004140 GO:0000145|GO:0006887
Psa3g4596 678 SUPERFAMILY Cullin repeat-like 107 666 IPR016159 -
Psa3g4596 678 MobiDBLite consensus disorder prediction 457 484 - -
Psa3g4596 678 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 22 672 - -
Psa3g4596 678 MobiDBLite consensus disorder prediction 464 484 - -
Psa3g4596 678 Coils Coil 149 169 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g4596 Psa-Chr3 427335555 427338748 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g4596 12 678 EXO70 exocyst subunit family AT3G29400 48.529 0.0 579
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g4596 K07195 - gmx:100799102 1053.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa3g4596 3 427335555 427338748 Psa3g4596 3 427335555 427338748 ECH