Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g4576 ATGGTGTCATTTCTTCACACACTTCTAGCCTTTCCTTTATTGGTGTTATTCCTTTTCATGAAATACAAAACCAGTAACAAGAACTCACCATCAACCTTTCCAAGAGGTCCAAAAGGCCTTCCCATACTTGGAAACCTCCATCAACTTGACATTTCAAATCTCCATATTCAGTTCTGGAACCTCTCAAAAATTTACGGTCCTCTTTTCTCCCTTCAAATTGGTTTCAAGAAAGCCATAGTTATTTCCACACCTAAACTAGCTCAACAAATTCTCAAAGATCATGACCATGATGTATCCAGTAGACCCCCATCACGTGGCACACAAGCACTGTCTTACAATGGCATAGACATGATATTTTCACCTTACAATGATTGTTGGAGAGAGATAAGAAAAATCTGTGTTGTCCATTTCTTTAGCTCCAAAAAGATTTCTAGCTTCTCTCATATTAGAAAATCTGAGGTCAAGAAATTGATTGAAAAGATATCTAAGCATGCTGACTCTTCCAAGGTTTCAAACCTTAGTGAGATTCTCATGTCACTGTCAAGCTCTATGGTGTGTAGAATTGCTTTTGGAAAAAGTTATGAAAATGAAGGAGGTGAAAAAAGCAGGTTCCATGATTTACTTAATGAGACGCAGGTCATTTTCCTTTCCTTTTATGTTTCAGATTATATTCCTTTCATGGGATGGATTGATAAACTCACAGGCTCAATTGCTCGTGTTGACAACACTTTTAAGTCCTTGGATGCATTTTTTGAACAAGTTCTTAAGGAACATCTCAATCCTAATAATAGCAAGAAAGAAGAACAAGAGAAGGATATAGTTGATGTGTTGCTTGAGTTAAAAAATCAAGGTCATCTCTCAATTGATCTCACCAATGATCACATCAAAGCTGTCCTTATGAACCTACTTGTGGCGGCTACTGACACAAGTGCAGCCACATCAGTTTGGGTGATGACTGGACTAATGAAGAATCCAAGAGCAATGAAGAGAGCTCAAGAAGAAGTTAGAAGCGTTTGTGGGAAAAAAGAGTTTATAGATGAAGATGATATTCAAAAGCTTGTATATCTCAAAGCTGTGATAAAAGAAACACTAAGATATTATGCACCAGCACCACTAGCCCCAAGAGAGACCAAAAGAGGTTTTGTTCTAGATGGATATAAAATAGAACCAAAAACGTTAGTGTATGTGAACATTTGGGCTATTCATAGGGATCCCGAGACATGGAAAGATCCAGAAGAGTTTTATCCCGAAAGATTCTTAAACAATGATGTTGAATTTAAAGGACTAGGTTTTGAGTTGATTCCGTTCGGCGGTGGACGTAGAATTTGCCCCGGTATACCATTGGCAATCGCTACATTAGAAATGGTGACTGCAAACCTTCTCAATTCATTTGATTGGGAAATGCCTGAAGGGATGACAAAGGAAGATATTGACATTGAAGGGTTGCCAGGACTTGCTAGACACAAGAAGAATCACCTTTGCATTGTTGCAAAACATCACAATTGA 1506 0.3805 MVSFLHTLLAFPLLVLFLFMKYKTSNKNSPSTFPRGPKGLPILGNLHQLDISNLHIQFWNLSKIYGPLFSLQIGFKKAIVISTPKLAQQILKDHDHDVSSRPPSRGTQALSYNGIDMIFSPYNDCWREIRKICVVHFFSSKKISSFSHIRKSEVKKLIEKISKHADSSKVSNLSEILMSLSSSMVCRIAFGKSYENEGGEKSRFHDLLNETQVIFLSFYVSDYIPFMGWIDKLTGSIARVDNTFKSLDAFFEQVLKEHLNPNNSKKEEQEKDIVDVLLELKNQGHLSIDLTNDHIKAVLMNLLVAATDTSAATSVWVMTGLMKNPRAMKRAQEEVRSVCGKKEFIDEDDIQKLVYLKAVIKETLRYYAPAPLAPRETKRGFVLDGYKIEPKTLVYVNIWAIHRDPETWKDPEEFYPERFLNNDVEFKGLGFELIPFGGGRRICPGIPLAIATLEMVTANLLNSFDWEMPEGMTKEDIDIEGLPGLARHKKNHLCIVAKHHN* 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g4576 501 Pfam Cytochrome P450 34 492 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa3g4576 501 PRINTS P450 superfamily signature 305 322 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa3g4576 501 PRINTS P450 superfamily signature 358 369 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa3g4576 501 PRINTS P450 superfamily signature 434 443 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa3g4576 501 PRINTS P450 superfamily signature 443 454 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa3g4576 501 PANTHER CYTOCHROME P450 71B11-RELATED 7 499 - -
Psa3g4576 501 SUPERFAMILY Cytochrome P450 34 496 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa3g4576 501 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 436 445 IPR017972 GO:0005506|GO:0016705
Psa3g4576 501 PRINTS E-class P450 group I signature 62 81 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa3g4576 501 PRINTS E-class P450 group I signature 86 107 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa3g4576 501 PRINTS E-class P450 group I signature 180 198 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa3g4576 501 PRINTS E-class P450 group I signature 294 311 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa3g4576 501 PRINTS E-class P450 group I signature 314 340 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa3g4576 501 PRINTS E-class P450 group I signature 357 375 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa3g4576 501 PRINTS E-class P450 group I signature 397 421 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa3g4576 501 PRINTS E-class P450 group I signature 433 443 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa3g4576 501 PRINTS E-class P450 group I signature 443 466 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa3g4576 501 Gene3D Cytochrome P450 26 501 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa3g4576 501 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 7 499 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g4576 Psa-Chr3 424949682 424951790 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g4576 17 500 Cytochrome P450 AT4G31500 44.262 2.85e-150 437
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g4576 - - gmx:100806470 679.478