Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g4544 ATGGCAGCTTCTGTATTCACCGTCTCACAAGACGGAACCGGAGATTTTCAAACGGTGCAAGAAGCAATCGACGCTGTGCCGCTCGGCAACTCTCGCCGGACTGTCATCCGTGTTTCTCCCGGAATCTACCGCCAGCCTGTATACGTTCCCAAAACCAAGAATTTCATCACTCTTGCTGGTTTGTGTCGCGAGGATACTGTGATAACTTGGAACAACACTGCCACCAAAATTGATCACCATCAACATGCTAGGGTGATTGGTACTGGGACATTTGGTTGTGGAACTACCATTGTGGAAGGGGAAGATTTTATTGCTGAGAATATTACTTTCGAGAATTCTTCCCCTCAGGGTTCAGGACAAGCGGTGGCAATTAGGGTAACAGCAGATCGTTGCGCCTTTTACAATTGCAGGTTCCTTGGGTGGCAGGACACACTATACTTGCATTATGGTAAACAATATTTGAAAGATTGCTATATTGAAGGAAGCGTGGACTTCATCTTTGGCAATAGCACTTCTCTTTTAGAGCACTGTCATATTCACTGCAAATCCGCAGGGTTCATAACCGCGCAGGCTAGAAAATCATCGCAGGAAACAACCGGTTATGTATTCTTGAGATGCGTTATCACAGGTAATGGAGGAACTTCATATGCATATCTTGGACGACCGTGGGGACCTTTTGGAAGGGTGGTGTTTGCATACACTTACATGGATCCGTGTATAAGACAAGTTGGTTGGGATAACTGGGGGAAAGTCGAGAATGAGAGGAGTGCTTGCTTTTACGAATACAGGTGTTTCGGACCTGGTTGTTGTCCAACCGATCGAGTAGGATGGTGTAGAGAATTGATTGATGAAGAAGCAGAACATTTCATCCTGCATCCTTTCATTGATCCAGAACCAGATAGATCTTGGCTTTGTCAAAGAATGGGCTTGAAGATTCCTTATTCGGCTTAG 951 0.4543 MAASVFTVSQDGTGDFQTVQEAIDAVPLGNSRRTVIRVSPGIYRQPVYVPKTKNFITLAGLCREDTVITWNNTATKIDHHQHARVIGTGTFGCGTTIVEGEDFIAENITFENSSPQGSGQAVAIRVTADRCAFYNCRFLGWQDTLYLHYGKQYLKDCYIEGSVDFIFGNSTSLLEHCHIHCKSAGFITAQARKSSQETTGYVFLRCVITGNGGTSYAYLGRPWGPFGRVVFAYTYMDPCIRQVGWDNWGKVENERSACFYEYRCFGPGCCPTDRVGWCRELIDEEAEHFILHPFIDPEPDRSWLCQRMGLKIPYSA* 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g4544 316 Pfam Pectinesterase 7 296 IPR000070 GO:0030599|GO:0042545
Psa3g4544 316 Gene3D - 2 309 IPR012334 -
Psa3g4544 316 PANTHER PECTINESTERASE 1 315 - -
Psa3g4544 316 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 1 315 - -
Psa3g4544 316 SUPERFAMILY Pectin lyase-like 2 298 IPR011050 -
Psa3g4544 316 ProSitePatterns Pectinesterase signature 2. 159 168 IPR033131 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g4544 Psa-Chr3 423069068 423071424 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g4544 5 307 Carbohydrate Esterase AT5G47500 39.297 6.06e-71 222
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g4544 K01051 - gmx:100795636 605.52
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa3g4544 3 423069068 423071424 Psa3g4544 3 423069068 423071424 ECH