Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g4525 ATGGGTTCCTATTCCAATGAGAAAGAGAGCAATATAGTGGAAACTGTCACTCCACAAACAGAAACAGATGATAGTGATACCCTCTTATATTCCAATGAGAAAGAGAGCAATATAGTGGAAACTGTCACTCCACAAACAGAAACAGATGATAGTGATACCCTCTTAGCCATGGTTCTAGGTGCCAATTTGGTGTTTCCTGCTGTTCTTAATGCTGCCATTCAACTCAATCTGTTTGAAATCATTGGTAATGAATTCATGTCAGCTATTGAAATTGCTTCAAAGTTACCAGCTCAACACTCTGACTTACCAAATCGGCTCGAACGTATGTTGTATCTGCTTGCTAGCTACTCTCTTCTTTCTGTTTCCAGTTGCACCAACGACGACGGTAGCAAAGTGAGAGTTTATGGGGTCACACGTTCTGGCAAATACTTTGTTAATGATGAAAATGATGGTGGTTATTTGGGTTCATTCACATCATTTATGTGGCACCGTGCTTTGTTAGGAGTGTGGTTGAATTTTAAGGAAGCAATCATTGATCCAGAGATTGATCTATTCAAGAAAGTTAATGGAATATCTAACTATGAGTACTTTGGGATAGATCCACAAATAAATCAATTATTTAACAGATCAATGACAGATGCATGCAATGTTCACGTTAAAAGAATCCTTGACATATACAAAGGATTTGAAGGGGTATCAACTTTGGTTGATGTAGGAGGTGGCAATGGACAAAGTCTCAAATTGATTATTGCCAAATATCCATCAATAAAGGCAATCAATTTTGACCTTCCACAAGTGATTGACAATGCACCACCCTTTACAGGTATTGAACATGTTGGAGGGAGTATGTTTGAGAGTATTCCACAAGGAGATGCCATAATACTTAAGGCTGTATGCCATAACTGGTCAGATGAACAATGCATAGAAATTTTAAGTAACTGTCACAAAGCTCTACCTCCAAATGGAAAGGTGATTATCATAGAGCTTGCACAACTAGAAGATCCAGAACCAACAGATGCATCTAGGATGATTGCAATTATTGATAACATCATGTTTATCACAGCTGGTGGAAGGGAAAGAACTCCAAAAGAATATGAGAGTTTGGGTAAACAATCTGGATTTTCTAAGCTTCAAGTTGTTTGTCGCGCTTTCTCCATAGTCGGAGTCATGGAACTTTACAAATAA 1185 0.3814 MGSYSNEKESNIVETVTPQTETDDSDTLLYSNEKESNIVETVTPQTETDDSDTLLAMVLGANLVFPAVLNAAIQLNLFEIIGNEFMSAIEIASKLPAQHSDLPNRLERMLYLLASYSLLSVSSCTNDDGSKVRVYGVTRSGKYFVNDENDGGYLGSFTSFMWHRALLGVWLNFKEAIIDPEIDLFKKVNGISNYEYFGIDPQINQLFNRSMTDACNVHVKRILDIYKGFEGVSTLVDVGGGNGQSLKLIIAKYPSIKAINFDLPQVIDNAPPFTGIEHVGGSMFESIPQGDAIILKAVCHNWSDEQCIEILSNCHKALPPNGKVIIIELAQLEDPEPTDASRMIAIIDNIMFITAGGRERTPKEYESLGKQSGFSKLQVVCRAFSIVGVMELYK* 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g4525 394 Gene3D - 64 222 IPR036388 -
Psa3g4525 394 Pfam O-methyltransferase domain 170 375 IPR001077 GO:0008171
Psa3g4525 394 PIRSF O-mtase 32 394 IPR016461 GO:0008168
Psa3g4525 394 SUPERFAMILY "Winged helix" DNA-binding domain 50 148 IPR036390 -
Psa3g4525 394 Pfam Dimerisation domain 68 114 IPR012967 GO:0046983
Psa3g4525 394 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 57 394 IPR016461 GO:0008168
Psa3g4525 394 Gene3D Vaccinia Virus protein VP39 204 383 IPR029063 -
Psa3g4525 394 MobiDBLite consensus disorder prediction 1 24 - -
Psa3g4525 394 PANTHER O-METHYLTRANSFERASE 30 394 IPR016461 GO:0008168
Psa3g4525 394 CDD AdoMet_MTases 234 327 - -
Psa3g4525 394 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 151 391 IPR029063 -
Psa3g4525 394 PANTHER CAFFEIC ACID O-METHYLTRANSFERASE 30 394 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g4525 Psa-Chr3 422051420 422053030 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g4525 42 394 Monolignol Biosynthesis Gene Families AT5G54160 44.663 6.11e-105 312
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g4525 - - gmx:100798295 509.605