Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g4523 ATGGGTTCTTATTCCAATGAGAAAGAGAGCAATATAGTGGAAACTGTCACCCCACAAACAGAAACAGATGATAGTGATACCCTCTTAGCCATGGTTCTAGGTGCCAATTTGGTGTTTCCTGCTGTTCTTAATGCTGCTATTGAACTCAAACTGTTTGAAATCATTGGTAATGAATTCATGTCAGCTATTGAAATTGCTTCAAAGTTACCAGCTCAACACTCTGACTTACCAAATCGTCTCGAACGTATGTTGTACATGCTTGCTAGCTACTCTCTTCTTTCTGTTTCCAGTTGCACCAACGACGACGGTAGCAAAGTGCGAGTTTACGGGGTCACACGTTCTGGCAAATACTTTGTTAATGATGAAAATGATGGTGGTTATTTGGGTTCATTCACATCATTTATGTGCCACCGTGCTTTGTTAGGAGTGTGGTTGAATTTTAAGGAAGCAATCATTGATCCAGAGATTGATCTATTCAAGAAAGTTAATGGAATATCTAAGTATGAGTACTTTGGGACAGATCCACAAATAAATCAATTATTTAACAGATCAATGACAGATGCATGCAATGTTCACGTTAAAAGAATCCTTGACATATACAAAGGATTTGAAGGGGTATCAACTTTGGTTGATGTAGGAGGTGGCAATGGACAAAGTCTCAAATTGATTATTGCCAAATATCCATCAATAAAGGCAATCAATTTTGACCTTCCACAAGTGATTGACAATGCACCACCCTTTACAGGTATTGAACATGTTGGAGGAAGCATGTTTGAGAGTATTCCACAAGGAGATGCCATAATACTTAAGGCCGTATGCCATAATTGGTCAGATGAACATTGCGTAGAAATTTTAAGGAATTGTCACAAAGCTCTACCTCCAAATGGAAAGGTGATTATCATAGAGCTTGCACAATCAGAAGATCCAGAACCAACAGATGCATCTAGGATGATTGCAATTGCTGATAACATCATGTTTATCACAGCTGGTGGAAGGGAAAGAACTCCAAAAGAATATGAGAGTTTGGGTAAACAATCTGGATTTTCTAAGCTTCAAGTTGTTTGTCGCACTTTCTCCATAGTCGGAGTCATGGAACTTTACAAATAA 1107 0.3848 MGSYSNEKESNIVETVTPQTETDDSDTLLAMVLGANLVFPAVLNAAIELKLFEIIGNEFMSAIEIASKLPAQHSDLPNRLERMLYMLASYSLLSVSSCTNDDGSKVRVYGVTRSGKYFVNDENDGGYLGSFTSFMCHRALLGVWLNFKEAIIDPEIDLFKKVNGISKYEYFGTDPQINQLFNRSMTDACNVHVKRILDIYKGFEGVSTLVDVGGGNGQSLKLIIAKYPSIKAINFDLPQVIDNAPPFTGIEHVGGSMFESIPQGDAIILKAVCHNWSDEHCVEILRNCHKALPPNGKVIIIELAQSEDPEPTDASRMIAIADNIMFITAGGRERTPKEYESLGKQSGFSKLQVVCRTFSIVGVMELYK* 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g4523 368 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 125 365 IPR029063 -
Psa3g4523 368 Gene3D - 38 196 IPR036388 -
Psa3g4523 368 PANTHER CAFFEIC ACID O-METHYLTRANSFERASE 1 368 - -
Psa3g4523 368 PIRSF O-mtase 7 368 IPR016461 GO:0008168
Psa3g4523 368 Pfam Dimerisation domain 42 88 IPR012967 GO:0046983
Psa3g4523 368 Gene3D Vaccinia Virus protein VP39 178 356 IPR029063 -
Psa3g4523 368 CDD AdoMet_MTases 208 301 - -
Psa3g4523 368 SUPERFAMILY "Winged helix" DNA-binding domain 24 122 IPR036390 -
Psa3g4523 368 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 31 368 IPR016461 GO:0008168
Psa3g4523 368 Pfam O-methyltransferase domain 144 349 IPR001077 GO:0008171
Psa3g4523 368 PANTHER O-METHYLTRANSFERASE 1 368 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g4523 Psa-Chr3 421967980 422004138 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g4523 16 368 Monolignol Biosynthesis Gene Families AT5G54160 45.225 2.14e-106 315