Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g4521 ATGGGTTCCTATTCCAATGAGAAAGAGAGCAATATAGTGGAAACTATCACTCCACAAACAGAAACAGATGATAGTGATACCCTCTTAGCCATGGTTCTAGGTGCCAATTTGGTGTTTCCTGCTGTTCTTAATGCTGCTATTGAACTCAACCTGTTTGAAATCATTGCTAAAGAAAGCATTGATGGATTCATGTCAACCTCTGAAATTGCTTCAAAGCTACCAGCTCAACACTCCGACTTACCGAATCGGCTAGAACGTATGCTGCGCATGCTTGCTAGCTACTCTCTTCTTTCTGTTTCGACTCGCGCCAATGACGACGGTACCACCGTGAGAGTTTACGGAATCACATCTTCAGGAAAGTACTTTGTTGATGATGAAAATGATGGTGGTTATTTGGGCTCATTCACATCATTTATGTGCCACCGCGCTTTGTTAGGGGTCTGGTTGAATTTTAAGGAAGCTGTCATTGATCCAGAGATTGACCTATTCAAGAAAGTTAATGGAATATCCAAATATGAGTACTTTGGGAAAGATCAACAAATAAACAAACTATTCAACAAATCAATGACTGATACATGCAATGTTCACATTAAAAGAGTCCTTGACATATACAAAGGATTTGAGGGAGTATCAACTTTGGTTGATGTAGGAGGTGGCAATGGACAAAGTCTCAAATTGATTATAGAAAAATATCCATCTATAAAAGCAATCAATTTCGACCTTCCACAAGTCATTGACAATGCCGCACCCGTCCCAGGTATTGAACATGTTGGAGGAAGTATGTTTGAGAGTATTCCAGAAGGAGATGCCATAATACTTAAGGCTGTATGCCATAACTGGTCAGATGAACAATGCATAGAAATTTTAAGTAACTGTCACAAAGCTCTACCTCCAAATGGAAAGGTGATTTTCATAGAGCTCGCGCAACCGGAAGATCCAGAACCAACGAATGCATCGAAGATGATCTCAATTATTGATAACATCATGTTTATCACAGCTGGTGGAAGGGAAAGAACTCCAAAACAGTATGAGAATTTGGGTAAACAGGCTGGATTTTCTAAGCTTCATGTTGCTTGTCGCGCTTTCTCCATCATCGGAGTCATGGAACTTTACAAATAA 1119 0.3995 MGSYSNEKESNIVETITPQTETDDSDTLLAMVLGANLVFPAVLNAAIELNLFEIIAKESIDGFMSTSEIASKLPAQHSDLPNRLERMLRMLASYSLLSVSTRANDDGTTVRVYGITSSGKYFVDDENDGGYLGSFTSFMCHRALLGVWLNFKEAVIDPEIDLFKKVNGISKYEYFGKDQQINKLFNKSMTDTCNVHIKRVLDIYKGFEGVSTLVDVGGGNGQSLKLIIEKYPSIKAINFDLPQVIDNAAPVPGIEHVGGSMFESIPEGDAIILKAVCHNWSDEQCIEILSNCHKALPPNGKVIFIELAQPEDPEPTNASKMISIIDNIMFITAGGRERTPKQYENLGKQAGFSKLHVACRAFSIIGVMELYK* 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g4521 372 Pfam Dimerisation domain 42 92 IPR012967 GO:0046983
Psa3g4521 372 PANTHER CAFFEIC ACID O-METHYLTRANSFERASE 1 372 - -
Psa3g4521 372 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 31 372 IPR016461 GO:0008168
Psa3g4521 372 SUPERFAMILY "Winged helix" DNA-binding domain 24 126 IPR036390 -
Psa3g4521 372 Pfam O-methyltransferase domain 148 353 IPR001077 GO:0008171
Psa3g4521 372 PANTHER O-METHYLTRANSFERASE 1 372 IPR016461 GO:0008168
Psa3g4521 372 CDD AdoMet_MTases 212 305 - -
Psa3g4521 372 Gene3D Vaccinia Virus protein VP39 125 372 IPR029063 -
Psa3g4521 372 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 129 368 IPR029063 -
Psa3g4521 372 PIRSF O-mtase 7 372 IPR016461 GO:0008168
Psa3g4521 372 Gene3D - 6 122 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g4521 Psa-Chr3 421864542 421866260 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g4521 16 372 Monolignol Biosynthesis Gene Families AT5G54160 44.413 1.08e-106 316
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g4521 - - gmx:100798295 531.176