Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g4513 ATGTCAGAAAAAGATTACAACAACTCATCCTTAAACGTGCCTTTAGTAACTGAATGCAAGTTAGAACATTCCATTGATCATGAAGAGAAAATTATAGCCTCTCATCTATCAAACAAAAATGAATTATCTTTTCTCCGAACATGTATTAATGGACTCAATGCAATTGCAGGTGTTGGAATACTATCAGTTCCATATGCATTGGCCTCAGGAGGATGGTTAAGTTTATCACTTTTAATTTCGATTGCGGCAGTAGCGTTTTACTCGGGTTTATTAATGAAAAGATGCATGGAAAAAAATCCGAATATTCGAACATATCCTGATATTGGTGAAGTTGCATTTGGAAAAACAGGAAGATTAATAGTATCAGTATCAATGTATACAGAACTATACTTGGTTTCGATAGGGTTCTTGATTCTCGAGGGCGACAATTTGAGTAACTTATTACCGATCGAAGAGTTTCGAGTGGTTGGTTTATCCATCGGCGCAAAGCAGTTCTTTGTGATATTGGTTGCTCTAATTATTTTGCCGACGGTTTGGTTGGATAATCTGAGTTTGCTTTCTTATGTATCTGCAAGTGGTGTCTTTGCTTCTGCTATTATCATTTTGTCAATATCATGGACTGCAGCATTTGATGGAGTTGGTTTTCATCAAAAGGGTGATATTGTGAATTGGAATGGAATCCCTTCTGCTGTTAGCTTGTATGCTTTTTGCTATTGTGCACATCCAGTTTTCCCTACTCTATACAATTCCATGAGGAACAAACATCAATTCTCAAATGTCCTAATGGTATGCTTTATATTAACCACAGCTGGTTATGCATCAATGGCTATAATTGGTTACTTAATGTTTGGTTCAAATGTTGAATCACAAGTAACATTAAACTTACCACTAAATAAATTAAGTTCAAAAATTGCAATATACACAACCTTGGTGAATCCAATAGCAAAGTTTGCTTTGATGGCAACACCAATTACAAATGCTTTGAAAGATTTATTTCCAACAACATACAAGAATAATAGAGTGACCAACATCTTTGTGAGCACTGTCCTTGTCATTACCAATGTTATTGTTGCATTGAGTATTCCATTCTTTGGTTCTCTTATGTCATTGGTTGGAGCATTTCTAAGTGTCACTGCTTCTATTTTGCTTCCTTGTTTGTGTTACTTGAAGATTTCTGGCACTTATAGGAATTTTGGGGTTGAGACTGTGACAATAGTGATGATAATAGTAGTAGCTATAGTAATGGGAATATCTGGGACATATACTTCAGTTGTTGAAATAGTGCAAAACTTGTAA 1296 0.3526 MSEKDYNNSSLNVPLVTECKLEHSIDHEEKIIASHLSNKNELSFLRTCINGLNAIAGVGILSVPYALASGGWLSLSLLISIAAVAFYSGLLMKRCMEKNPNIRTYPDIGEVAFGKTGRLIVSVSMYTELYLVSIGFLILEGDNLSNLLPIEEFRVVGLSIGAKQFFVILVALIILPTVWLDNLSLLSYVSASGVFASAIIILSISWTAAFDGVGFHQKGDIVNWNGIPSAVSLYAFCYCAHPVFPTLYNSMRNKHQFSNVLMVCFILTTAGYASMAIIGYLMFGSNVESQVTLNLPLNKLSSKIAIYTTLVNPIAKFALMATPITNALKDLFPTTYKNNRVTNIFVSTVLVITNVIVALSIPFFGSLMSLVGAFLSVTASILLPCLCYLKISGTYRNFGVETVTIVMIIVVAIVMGISGTYTSVVEIVQNL* 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g4513 431 PANTHER AMINO ACID TRANSPORTER AVT1J 38 428 - -
Psa3g4513 431 Pfam Transmembrane amino acid transporter protein 42 421 IPR013057 -
Psa3g4513 431 PANTHER OS05G0424000 PROTEIN-RELATED 38 428 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g4513 Psa-Chr3 421242750 421244750 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g4513 28 428 Amino Acid or Auxin Permease AAAP Family AT3G28960 58.354 4.19e-174 491
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g4513 K15015 - gmx:100794374 647.121
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa3g4513 3 421242750 421244750 Psa3g4513 3 421242750 421244750 ECH