Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g4510 ATGTCTGCAAAATTTGCTGGAGAAGTCCAATGCACATTAAATGTGCCCTTACTAGGAGATGCTATAGATAATGAAGAGAAGAGAGTTAGAGCCTCTGATCCTCCAAACAAAAATGAAGCATCTTTTTTTCATACATGTCTTAATGGAATCAATTCCATTGCAGGTGTTGCAACACAATCAGTTGCATATGCATTAGCCTCAGGAGGATGGTTAAGTTTAGCACTTTTTTTTTCTATTGCTGCAGCAGCATTTTACACTGCCTTATTAATGAAAAGATGTATGGAAAAACATTCCAGCATTAAGACATTTCCTGACATGGGTGAACATGCATTTGGAAAAACAGGAAAATTAATAGCAGAAATATCAATGTATACTGAGGTCTACTTGGTTTCTATAGGTTTCTTGATTCTAGAAGGAGACAATTTGAGTAACCTATTTTCTATGGAAGAGTTTCAAGTGGCTGGTATATCAATTGGTGCAAAGCAATTCTTTGTGATATTGGTTGCACTTATTATTTTGCCGACGATTTATATGGAAAATCTGAGTTTGATTTCTTATGTATCTGCAAGTGGTGTCTTTGCTTCTACAGCTATTGTATTGTCAATAGCATGGACTGCAGCATTTGATGGAGTTGGTGTTCATCAAAAGGGTGATTTATTGAATTGGAATGGTATTCCTACAGCTGTTAGCTTGTATATCTATTGCTATAGTGCACATCCTATTTTTCCAGTTCTCTACACTTCCATGAAGAATAAACGTCAATTCTCAAATGTCCTATGTGTATGCTTTATGTTCGCAACAACTATTTGTGCATCAATGGCTATAATTGGTTACTTGATGTTTGGTTCAAAAGTTGAATCACAAATAACATTAAGCTTACCATTAAACAAAATAAGTTCAAGAATAGCTATATACACAACCTTGGTGACTCCAATGTCTAAGTTTTCTTTGATGGTATTACCAATTACAAACGCTTTAAAAGATTTACTCCCAAAGACTTACAAGAATAAGAAAATGGCCAATATCTTTTTGAGTACTATTCTTTTAATTAGTATGGTGATTGTTACATTGACTCTTCCATTTTTTGGATCTCTCATGTCATTGGTTGGAGCATTTTTAACTGTCACGGCATCTATTCTTCTTCCTTGTTTGTGTTACTTAAAGATTTCAGGCACTTACAGGAAATTTGAGTTTGAGACAATGGCAATAGTGCTAATAATATTAGTTTCTATAGTGATGGGAATATCTGGAACATACACTTCAGTTGTTGACCTAATACAAAAGTCTTATAACAAATAG 1299 0.3418 MSAKFAGEVQCTLNVPLLGDAIDNEEKRVRASDPPNKNEASFFHTCLNGINSIAGVATQSVAYALASGGWLSLALFFSIAAAAFYTALLMKRCMEKHSSIKTFPDMGEHAFGKTGKLIAEISMYTEVYLVSIGFLILEGDNLSNLFSMEEFQVAGISIGAKQFFVILVALIILPTIYMENLSLISYVSASGVFASTAIVLSIAWTAAFDGVGVHQKGDLLNWNGIPTAVSLYIYCYSAHPIFPVLYTSMKNKRQFSNVLCVCFMFATTICASMAIIGYLMFGSKVESQITLSLPLNKISSRIAIYTTLVTPMSKFSLMVLPITNALKDLLPKTYKNKKMANIFLSTILLISMVIVTLTLPFFGSLMSLVGAFLTVTASILLPCLCYLKISGTYRKFEFETMAIVLIILVSIVMGISGTYTSVVDLIQKSYNK* 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g4510 432 Pfam Transmembrane amino acid transporter protein 40 420 IPR013057 -
Psa3g4510 432 PANTHER AMINO ACID TRANSPORTER AVT1J 38 426 - -
Psa3g4510 432 PANTHER OS05G0424000 PROTEIN-RELATED 38 426 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g4510 Psa-Chr3 420994528 420996104 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g4510 23 426 Amino Acid or Auxin Permease AAAP Family AT3G28960 51.485 1.09e-152 437
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g4510 K15015 - gmx:100794374 571.622
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa3g4510 3 420994528 420996104 Psa3g4510 3 420994528 420996104 ECH