Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g4508 ATGGCTGCAACTTCTGATCACACCACCTTAAATTTTCCTTTACTATCTGAGAAGAATCTAGTTGATGAGGAGGAACTCATAGCCTCTGATGCTCCAAACAAAAATGGAGTATCTTTTATTCGAACGTGTTTCAATGGACTCAATGCAATATCAGGTGTTGGAATACTATCAGTTCCATATGCTTTGGCCTCAGGAGGATGGCTAAGTTTAGTACTTTTATTTTCTATTGCAGGAGTAACATTTTACACTGGTGTATTAATGAAAAGATGCATGGTAAAACATTCCAACATTCGAACATTTTCTGATATGGGTGAACTTGCATTTGGAAAAAGAGGAAAATTAATAGCATCAATATCAATGTACTCCGAGTTCTATTTGCTTTTAATAGGTTTCTTGATCCTAGAAGGAGACAATTTGAGTAACTTATTTCCTATTGAAGAGTTTCAAGTGGCTGGTATATCAATTCGTGCAAAGCAATTCTTTGTGATTTTGGTTGCTCTAATTATTTTGCCGACGGTTTGGTTGGACAATTTGAGTTTTCTTTCTTATGTATCTGCAAGTGGTGTCTTGGCTTCTGCTATTATCATTTTGTCAATAATATGGACTGCAGCATTTGGAGGAGTTGGTGTTCATCAAAAGGGTGATTTAATAAATTGGAATGGTATCCCTACAGCTGTTGGCTTGTATACATTTTGCTATAGTGCACATCCCATTTTTCCAGTTCTCTACACTTCCATGAAGAACAAACGTCAATTCTCTTATGTCCTAATTGTGTGCTTCATGTTACCAACGGTTGGTTTTGTAACTATGGCTATAATTGGTTACTTAATGTTTGGCTCAAAAGTTGAATCACAAGTAACATTAAACTTACCACTAAACAAAATAAGTTCAAAAATAGCAATATACACAACCTTGGTAAATCCAATGTGTAAGTTTGCATTGATTGCAATACCAATTACAAATGCTCTAAAAAATTTACTTCCAAGGACATACAAGAATAATAGAATAGCCAACATTTTTATGAGTACTTTTCTTGTAATTAGTATTGTTATTGTTACATTGGCTCTTCCATTTTTTGGATCTCTCATGTCATTGGTTGGAGCATTTCTAACTATCACGGCTTCTATTTTGCTGCCTTGCACGTGTTACTTGAAGATTTCTGGAAGTTATAGAAAAATTGGATTTGAAACAATAGCAATAGTGACAATAATATTAGTAGCTATAGTGATGGGAATTTCAGGAACATACACTTCAATTGTTGAATTGGTACAAAAGTCTTCTAACAACTAG 1290 0.3434 MAATSDHTTLNFPLLSEKNLVDEEELIASDAPNKNGVSFIRTCFNGLNAISGVGILSVPYALASGGWLSLVLLFSIAGVTFYTGVLMKRCMVKHSNIRTFSDMGELAFGKRGKLIASISMYSEFYLLLIGFLILEGDNLSNLFPIEEFQVAGISIRAKQFFVILVALIILPTVWLDNLSFLSYVSASGVLASAIIILSIIWTAAFGGVGVHQKGDLINWNGIPTAVGLYTFCYSAHPIFPVLYTSMKNKRQFSYVLIVCFMLPTVGFVTMAIIGYLMFGSKVESQVTLNLPLNKISSKIAIYTTLVNPMCKFALIAIPITNALKNLLPRTYKNNRIANIFMSTFLVISIVIVTLALPFFGSLMSLVGAFLTITASILLPCTCYLKISGSYRKIGFETIAIVTIILVAIVMGISGTYTSIVELVQKSSNN* 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g4508 429 PANTHER OS05G0424000 PROTEIN-RELATED 35 423 - -
Psa3g4508 429 Pfam Transmembrane amino acid transporter protein 37 416 IPR013057 -
Psa3g4508 429 PANTHER AMINO ACID TRANSPORTER AVT1J 35 423 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g4508 Psa-Chr3 420836563 420840404 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g4508 23 423 Amino Acid or Auxin Permease AAAP Family AT3G28960 53.367 2.85e-156 446
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g4508 K15015 - gmx:100794374 587.415
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa3g4508 3 420836563 420840404 Psa3g4508 3 420836563 420840404 ECH