Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g4497 GTTCCATTTTACATAGCAGCTCAACTCACAGGAGCAATTTCTGCTTCGTACACACTTAGAGCATTGCTAGAGCCATCAAAGCACCTAGGTGCAACATCACCTTCTGGATCAAACATTCAAGCACTTATCATAGAAATTGTCACCACTTTCACCATGGTGTTCATCTCCACTGCTGTCGCAACCGACTCAAAAGCCATAGGAGAGGTTGCTGGAGTAGCTGTAGGTTCATCTGTTTGCATTGCAAGCATTGTTGCTGGACCAATTTCCGGGGGATCAATGAACCCAGCAAGAACATTAGGTCCTGCAATTGCTTCCGCATCTTACAAAGGAATTTGGGTTTATATGGTTGGACCAATTACTGGTGCACTTTTAGGTGCATGGTCTTATGTTGTGATTCAAGAGACAGATCATAAACAAGATATTGTAAATTTGCAATCTCCTCTTTCACTCAAGTTACACCATGAGATGAATGGGATTGAGCTATAG 486 0.4259 VPFYIAAQLTGAISASYTLRALLEPSKHLGATSPSGSNIQALIIEIVTTFTMVFISTAVATDSKAIGEVAGVAVGSSVCIASIVAGPISGGSMNPARTLGPAIASASYKGIWVYMVGPITGALLGAWSYVVIQETDHKQDIVNLQSPLSLKLHHEMNGIEL* 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g4497 161 PANTHER AQUAPORIN NIP2-1 1 144 IPR034294 -
Psa3g4497 161 SUPERFAMILY Aquaporin-like 1 139 IPR023271 -
Psa3g4497 161 PRINTS Major intrinsic protein family signature 44 62 IPR000425 GO:0015267|GO:0016020|GO:0055085
Psa3g4497 161 PRINTS Major intrinsic protein family signature 75 97 IPR000425 GO:0015267|GO:0016020|GO:0055085
Psa3g4497 161 PRINTS Major intrinsic protein family signature 112 132 IPR000425 GO:0015267|GO:0016020|GO:0055085
Psa3g4497 161 Gene3D Glycerol uptake facilitator protein. 1 143 IPR023271 -
Psa3g4497 161 Pfam Major intrinsic protein 1 129 IPR000425 GO:0015267|GO:0016020|GO:0055085
Psa3g4497 161 PANTHER MAJOR INTRINSIC PROTEIN, AQUAPORIN-LIKE PROTEIN-RELATED 1 144 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g4497 Psa-Chr3 420103168 420103883 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g4497 1 137 Major Intrinsic Protein MIP AT5G37820 51.799 9.84e-43 142
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g4497 K09874 - gmx:100795261 210.305