Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g4494 ATGGCTACAGTTCATTTAAAANAACATCATGTTAATGACCCTGATCCTGAACCAGTTCTGCTTGAAGCAATCCCCACTTTGAAGTTCAATCAAGAGGCTTTCAGTTCCATTGAAGATACACAGTGTGTAATATGTTTGGCGGACTACAAAGAAAGAGAAATATCGCGAATCATGCCGAAATGCGGCCACACTTTTCATCTTTGTTGA 207 0.3961 MATVHLKXHHVNDPDPEPVLLEAIPTLKFNQEAFSSIEDTQCVICLADYKEREISRIMPKCGHTFHLC* 69
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g4494 68 PANTHER OS11G0150450 PROTEIN 16 67 - -
Psa3g4494 68 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 3 68 IPR013083 -
Psa3g4494 68 PANTHER OS02G0676500 PROTEIN 16 67 - -
Psa3g4494 68 Pfam RING-like zinc finger 41 67 IPR001841 -
Psa3g4494 68 SUPERFAMILY RING/U-box 31 67 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g4494 Psa-Chr3 419840862 419841372 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g4494 22 67 C3H Transcription Factor Family AT4G10160 45.652 5.77e-09 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g4494 - - aip:107611002 119.398