Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g4467 ATGTCTAGCTCTAGTTGTTCAGAGATAGAAGAGAAGAGAGTTACTTCAATTTTCCATCAAGATGATTTCTCTACTCAACAAGAAGTTTCAAAGGAAGATAAACTAAAATATGCTAATACCGAGATGGGCGAGGTGAAAGAAGAAAACGAAAGATTGAAGACGATGCTATCGCGAGTTGAAAAAGACTACAATACCCTTCAACTTCGTTTCTTTGACATTGTTAACAAAGAAGTTTCTAACAATGGAGTAGAGGAATCATCAACTTCACATGAAGAAAATGATGAAGAACCCGAGTTCGTGTCACTTTGTCTCGGAAGAAGTCCAAATGAGTATAAGAAAGAAGCGGCGAAAATTGATCAAAATTCAAACAAGCCTAAAGAAAAAGAAGATATGGAAGTTAACCTTAGTCTTGGATTAGATTCTAAATATATGTTGTCAATGGAGTTAGTACCTGATTTGACTCCAATGAATAGCATAGAAGAATTACCAAAGGAAGTTGAAGTTGAAGAAAAAGGAACATTATTTTCAACAAATAAATCAACAAAGGTTATAAATGTAAATGATGAAGTTTCAGATCAAATGCCTACTAAGAGAGTTAGGGTATCTGTTAGAGCTAAATGTGACACTCCAACGATGAATGATGGATGCCAATGGAGGAAATATGGACAGAAAATCGCAAAAGGAAATCCGTGTCCAAGAGCATACTATCGTTGCACAGTCGCACCAGCATGTCCAGTTAGGAAACAGGTCCAAAGATGTGCTGATGATATGTCAATCTTAATCACAACATATGAAGGAACACACAATCATCCTCTTCAAGTAACAGCATCAGCCATGGCATACACTACTTCAGCTGCAGCATCAATGATGTTATCAGGTTCATCAACATCATCATCATCATCACATCATCAAAATCTTCATCATCACAACAATTCAACATCCTTTGGAAACTCACCAACACTACTCAACAATGGTCTAAATTTCAATCATCACCAATTCGAACAATCAAGAACACCAAAACAACATTTCTTCATTCCACCAAACCATTCCTCACATAATAGTTTGTTTCCAACAATCACTTTAGACCTAACTTCACCTTCATCCTTATCATCATCATCATCATTATCATCACCATCATCAAACATAGCTCCAATTCCAAGATTCTCTCCAAATAATCTTAATTTTTGTTCCACACAACAACCCAATTTCATACCATCATCAACCATTTGGAACAACAACAACAACAACAAATTAGGGTTAGGGTTCATCAACAATAACACAACAATGCCTATTGAGAAAACTCAAATTAGGCCTTTCAACCATTTCCAAGAAAATTTCTATCAAAAGTGTATGACAAATTATCAAACACCTTCAAGGCAAGCTTTGGCAGACACAATAAGCAAAGCAATTAGCACTGATCCAAGTCTTCATTCAGTTATAGCTGCTGCAGTTACATCAATCGTAGGCCAAGGATCAAACAAAGGTGTGAATCAAAAGGAAATTAAAGAGAATGGTTTAGGTTTAGGTTTGAAGCTTGGTGAGTATCCCCAATTGAGTTCAAACAATTTGTTGAATCAAAATGGCAAAGGATGCTTAAAGGGTTCATACTTCAAAAGGTTGTCACCAACAACAACTTCACAGGCTAAAAACTTCATGCTTCTTCAACCTTCATTGCCATTTTCTGTTTCTAAGAGTAGTGCTAGCAAATCTTCATCCATTGTTAATCATATCAATCATTGTGATTCAAATGTGAACACACATCATTAG 1767 0.3588 MSSSSCSEIEEKRVTSIFHQDDFSTQQEVSKEDKLKYANTEMGEVKEENERLKTMLSRVEKDYNTLQLRFFDIVNKEVSNNGVEESSTSHEENDEEPEFVSLCLGRSPNEYKKEAAKIDQNSNKPKEKEDMEVNLSLGLDSKYMLSMELVPDLTPMNSIEELPKEVEVEEKGTLFSTNKSTKVINVNDEVSDQMPTKRVRVSVRAKCDTPTMNDGCQWRKYGQKIAKGNPCPRAYYRCTVAPACPVRKQVQRCADDMSILITTYEGTHNHPLQVTASAMAYTTSAAASMMLSGSSTSSSSSHHQNLHHHNNSTSFGNSPTLLNNGLNFNHHQFEQSRTPKQHFFIPPNHSSHNSLFPTITLDLTSPSSLSSSSSLSSPSSNIAPIPRFSPNNLNFCSTQQPNFIPSSTIWNNNNNNKLGLGFINNNTTMPIEKTQIRPFNHFQENFYQKCMTNYQTPSRQALADTISKAISTDPSLHSVIAAAVTSIVGQGSNKGVNQKEIKENGLGLGLKLGEYPQLSSNNLLNQNGKGCLKGSYFKRLSPTTTSQAKNFMLLQPSLPFSVSKSSASKSSSIVNHINHCDSNVNTHH* 589
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g4467 588 MobiDBLite consensus disorder prediction 292 311 - -
Psa3g4467 588 Pfam WRKY DNA -binding domain 213 271 IPR003657 GO:0003700|GO:0006355|GO:0043565
Psa3g4467 588 Gene3D WRKY domain 197 272 IPR036576 GO:0003700|GO:0006355|GO:0043565
Psa3g4467 588 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 34 573 IPR044810 GO:0003700
Psa3g4467 588 PANTHER WRKY TRANSCRIPTION FACTOR 72-RELATED 34 573 - -
Psa3g4467 588 Coils Coil 35 69 - -
Psa3g4467 588 SMART WRKY_cls 212 272 IPR003657 GO:0003700|GO:0006355|GO:0043565
Psa3g4467 588 ProSiteProfiles WRKY domain profile. 207 273 IPR003657 GO:0003700|GO:0006355|GO:0043565
Psa3g4467 588 SUPERFAMILY WRKY DNA-binding domain 206 272 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g4467 Psa-Chr3 418840690 418843830 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g4467 42 366 WRKY Transcription Factor Family AT5G15130 46.459 2.98e-71 236
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Psa3g4467 WRKY 4.1e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g4467 - - mtr:MTR_7g009730 825.854