Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g4456 ATGGATCCCTTCAAAGGTCAAGGTGGCATTCAAATGCTTCTAACTGCTGAACAAGAAGCTCAACACATTGTTAACACTGCAAGAAATTTGAGGACTCAAAGGTTGAAGCAAGCAAAAGAAGAGGCTGAGAAAGAGGCAGCTGAATATAGAACTCACATGGAAGAAGAATATCAAAAGTCAATTTCAGAGACAACTGGGAGTTCAGGAACAAATGTGAAAAGGCTTGATCAAGAGACAGATGTTAAGATTAGAAGCTTAAAGAAATCAGGTTCAAAGGTTTCAAATGAAGTTGTGGACATGCTACTCAAGTATGTTACAAATATTAAAATGTAA 333 0.3694 MDPFKGQGGIQMLLTAEQEAQHIVNTARNLRTQRLKQAKEEAEKEAAEYRTHMEEEYQKSISETTGSSGTNVKRLDQETDVKIRSLKKSGSKVSNEVVDMLLKYVTNIKM* 111
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g4456 110 PANTHER VACUOLAR ATP SYNTHASE SUBUNIT G 1 109 IPR005124 GO:0016471|GO:0046961|GO:1902600
Psa3g4456 110 SUPERFAMILY F1F0 ATP synthase subunit B, membrane domain 11 58 IPR028987 -
Psa3g4456 110 Gene3D - 3 110 - -
Psa3g4456 110 TIGRFAM V_ATP_synt_G: V-type ATPase, G subunit 8 109 IPR005124 GO:0016471|GO:0046961|GO:1902600
Psa3g4456 110 MobiDBLite consensus disorder prediction 36 59 - -
Psa3g4456 110 Coils Coil 28 59 - -
Psa3g4456 110 MobiDBLite consensus disorder prediction 36 76 - -
Psa3g4456 110 PANTHER V-TYPE PROTON ATPASE SUBUNIT G3 1 109 - -
Psa3g4456 110 MobiDBLite consensus disorder prediction 60 74 - -
Psa3g4456 110 Pfam Vacuolar (H+)-ATPase G subunit 7 109 IPR005124 GO:0016471|GO:0046961|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g4456 Psa-Chr3 418314104 418317833 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g4456 8 108 Primary Pumps ATPases(2) AT4G23710 57.426 5.17e-36 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g4456 K02152 - gmx:100818549 166.007