Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g4428 ATGGCATATCAAAACTCAATTACCTTAAACTTTTTATTATTGCTGCTCGTTGTAGTAGTAGTTGATGCTGCCGATTCTGAAGGATGGTCTATAAATCCTAAGAAAACCGTTATAATTAGGAATGATATCGATCAACATCCAACCCCTTTAGATCTCACTCTTCATTGTAAATCAAAAAATGATGATCTTGGATTTCACACACTCGTATTTGGAGAAACTTACTCGTTTCGATTTAGACCGTCTTTAGTTCCAAGAATTGCTGAGGTTTTATACTTCTGTAGCTTTTCATGGAAAGGAAGTCCCTATCTTCACTATCTTGACGTTTACAATCAAGCCACAGATCACTGCAAAATTTGTAGTTGGAAAATAAGTAAAAATGGTGGTTGTAATGATTTTAAAGGATACGAGGTTTGTGAAGAATGGAATAGAATTCTACCAATGGATGCAAATAGTACTTCTGTGAAGTGA 468 0.3483 MAYQNSITLNFLLLLLVVVVVDAADSEGWSINPKKTVIIRNDIDQHPTPLDLTLHCKSKNDDLGFHTLVFGETYSFRFRPSLVPRIAEVLYFCSFSWKGSPYLHYLDVYNQATDHCKICSWKISKNGGCNDFKGYEVCEEWNRILPMDANSTSVK* 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g4428 155 Pfam Plant self-incompatibility protein S1 36 141 IPR010264 -
Psa3g4428 155 PANTHER - 22 141 IPR010264 -
Psa3g4428 155 PANTHER S-PROTEIN HOMOLOG 18-RELATED 22 141 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g4428 Psa-Chr3 416846402 416847304 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g4428 32 142 Carbohydrate Esterase AT3G16970 42.500 3.78e-24 89.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g4428 - - cam:101494349 150.214