Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g4422 ATGACAATTGGAAGTCTTGCACCTAAGACAGAGAAGAAGAAATCAAGAAAGAACAAAGCAGTTGTGAATGAGAATGCACCCTTGTTGCCTAAAAGTCAAGCCAATGAAAGTGATTCCGGGTTCGATGATTTCAACGGAGCTTCATTTTCCGGTGCTGTTTTCAATTTGGCAACAACAATTATTGGTGCTGGAATCATGGCTTTGCCCGCAACCTTGAAACAGTTAGGATTGATTCCCGGTCTTCTTGGTATACTCATGATGGCTTTTTTGACTGAGAAGTCAATTGAGCTTTTGATTAGGTTTACAAGAGCAGGAAAATCTGTTTCATATGCTGGTTTGATGGGTGATTCATTCGGGAAATATGGAAAAGCTTTGACGCAGATTTGCGTTATTGTTAATAACGTCGGCGTGCTTATTGTTTACATGATTATAATTGGTGATGTGCTCTCTGGAACATCTTCGAATGTAAAACATCACTACGGTATCCTTGAAGGATGGTTTGGTGTGCATTGGTGGACTGGAAGGACATTTATTGTCTTTCTTACGACGGTCGCTATATTTGCTCCCCTCGCATGCTTTAAGCGAATCGATTCGTTGAGATTCACATCCGCCCTTTCCGTTGCACTGGCGGCTGTTTTTCTTGTCATTGCCGTGGGAATTTCTGTCGTCAAGATCATAAGTGGAGGCATTAGCATGCCGAGACTCTTCCCAGTTGTTACCGATGCATCATCTATCGTTGACCTATTCACCGTGGTTCCCGTGTTTGTGACTGCCTATATCTGTCACTACAATGTTCACAACATTGATAACGAACTCGAGGACAACTCACAGATGCAAAACGTTGTACGTACGGCCCTTGGTCTATGCTCATCCGTGTACATGATGATAAGCTTCTTCGGGTTCCTCCTCTTCGGTGAAGGAACCCTTGATGACGTGCTTGCCAACTTCGATACCGATCTCGGAATCCCTTTTGGTTCTGTGCTCAACGACGCTGTTCGTATTAGCTACGCTGCACACCTCATGTTTGTATTTCCAGTTGTGTTTTTTCCGTTGCGACTCAATATAGACGGTCTTCTCTTCCCTTCGTCAAGACCTTTGGTTCTCGATAACTTCAGATTCGCATCAATGACTGCTTCCCTTATTGGTGTTATCTTCCTTGGAGCAAACTTCATACCTAGCATTTGGGATGCTTTCCAGTTCACCGGAGCAACCGCCGCAGTCTGTATAGGATTCATCTTTCCAGCCGCCATCACTCTCAAGGATCGCTACAATATAGCAACAAGATCAGACAAGATTCTATGCGTTGTTATGATAGTCCTCGCCGTCGCCTCAAATGTTGTGGCTATATACAGCAACGCATTTGGGTTGATCACGAAGAGCAATACTTCGCGCGAATGA 1398 0.4421 MTIGSLAPKTEKKKSRKNKAVVNENAPLLPKSQANESDSGFDDFNGASFSGAVFNLATTIIGAGIMALPATLKQLGLIPGLLGILMMAFLTEKSIELLIRFTRAGKSVSYAGLMGDSFGKYGKALTQICVIVNNVGVLIVYMIIIGDVLSGTSSNVKHHYGILEGWFGVHWWTGRTFIVFLTTVAIFAPLACFKRIDSLRFTSALSVALAAVFLVIAVGISVVKIISGGISMPRLFPVVTDASSIVDLFTVVPVFVTAYICHYNVHNIDNELEDNSQMQNVVRTALGLCSSVYMMISFFGFLLFGEGTLDDVLANFDTDLGIPFGSVLNDAVRISYAAHLMFVFPVVFFPLRLNIDGLLFPSSRPLVLDNFRFASMTASLIGVIFLGANFIPSIWDAFQFTGATAAVCIGFIFPAAITLKDRYNIATRSDKILCVVMIVLAVASNVVAIYSNAFGLITKSNTSRE* 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g4422 465 PANTHER AMINO ACID TRANSPORTER AVT6A 9 463 - -
Psa3g4422 465 PANTHER AMINO ACID TRANSPORTER 9 463 - -
Psa3g4422 465 Pfam Transmembrane amino acid transporter protein 47 450 IPR013057 -
Psa3g4422 465 MobiDBLite consensus disorder prediction 1 37 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g4422 Psa-Chr3 416500088 416505590 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g4422 3 465 Amino Acid or Auxin Permease AAAP Family AT3G30390 67.387 0.0 628
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g4422 K14207 - gmx:100796345 749.584
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa3g4422 3 416500088 416505590 Psa3g4422 3 416500088 416505590 ECH
Psa1g1472 1 99973029 99977428 Psa3g4422 3 416500088 416505590 PCT