Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g4409 ATGCCTCCCAAGCTCGACCCATCCCAAGTCGTCGAAGTTTACGTCCGCGTCACCGGAGGTGAAGTCGGAGCGGCGAGTTCCCTCGCTCCCAAGATCGGTCCCCTCGGTCTCTCCCCGAAAAGACCGGAAATTGCCTATGGCGGAGGCGGAGAGCCAAACAATATAAAACCTATATCATTTGTCTTGTTCCAAAGTCCTCTATCCGACTTCACCATCAATTTCATCTAA 228 0.5263 MPPKLDPSQVVEVYVRVTGGEVGAASSLAPKIGPLGLSPKRPEIAYGGGGEPNNIKPISFVLFQSPLSDFTINFI* 76
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g4409 75 PANTHER 60S RIBOSOMAL PROTEIN L12 1 41 IPR000911 GO:0003735|GO:0005840|GO:0006412
Psa3g4409 75 SUPERFAMILY Ribosomal L11/L12e N-terminal domain 1 41 IPR036796 -
Psa3g4409 75 Gene3D - 1 45 IPR036796 -
Psa3g4409 75 PANTHER 60S RIBOSOMAL PROTEIN L12 1 41 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g4409 Psa-Chr3 415418966 415419193 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g4409 1 72 Cytoplasmic Ribosomal Protein Gene Family AT3G53430 56.757 1.39e-21 80.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g4409 K02870 - ppp:112278276 82.8037