Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g4327 ATGGCTTTGGACCAACCCTCGTTACCTTCGAATCCTAACTCCGTTGATGGTGACGGGAACGGGAACGGGACGCCACCGTCCTCCACCGTGAATGGCGGCGAGGATGGGAAACCTACGGCGAGGCTACCGCGGTGGACGCGGCAGGAGATTCTGGTGCTTATACAGGGGAAGAGTGACGCGGAGAGCCGGTTCAAACCGGGTCGAAACGGTTCGGGGTTTGGTTCGAGTGAACCGAAATGGGCGTTGGTTTCGTCTTACTGTAAGAAGCACGGTGTGAACCGGGGGCCGATTCAGTGTCGGAAGCGGTGGAGTAATCTCGCCGGAGATTATAAGAAGATTAAGGAGTGGGAGACTCAGGTGAGAGATGAAACGGAGTCGTTTTGGTTGATGAGGAATGATTTGAGGAGAGAGAGGAAATTGCCGGGGTATTTTGATCGTGAGGTTTACGATATTCTTGATTCGCCGTCTGTGGCAGTGGCGGCAGCTGCCGCCGCGGCGGCGACGGTTCTTCCTATGGCTGTGTCGGTTTCGGAGGCGGTTGGTGATGATTTTGATCGTGAGGTTTACGATATTCTTGATTCGCCGTCTGTGGCAGTGGCGGCAGCTGCCGCCGCGGCGGCGACGGTTCTTCCTATGGCTGTGTCGGTTTCGGAGGCGGTTGGTGATGAGGAGGTTCATATTTACGACAGTAATAGGAAAGTGAGTGGTGAAGATGGGTTATTCTCGGATTTTGAGAAGGATGAGGTTTTGGTTTCCTCCAAAGATGTTCATGTTCCTTCACCTGTTCCTATCTCAGAGAAGCAGTTTCTACCGCCCCTCAGTCGCTGCCAAGGAGAAGGCAATGCTCAAGGTACCAACAATGAGAAACAACCCGCCTCAAATCCAGAAATGGGTTCTACATCTCAAGGGGAACGGAAGCGGAAACGGCTTCCAACCGATGAAGAAGACGAATCCTTGCAAAGTCAGTTAATCGACGTGTTAGAGAAAAACGGCAAGATGCTAAGCGAACAACTAGAGGCTCAGAACATCAACTTCCAACTGGATCGCCAGCACCAGAACGACACTGCAAGTAACATAGTTGCTGTGCTCGATAAGCTTGCAAATGCTCTTGGAAGAATTGCTGATAAATTGTAG 1134 0.5194 MALDQPSLPSNPNSVDGDGNGNGTPPSSTVNGGEDGKPTARLPRWTRQEILVLIQGKSDAESRFKPGRNGSGFGSSEPKWALVSSYCKKHGVNRGPIQCRKRWSNLAGDYKKIKEWETQVRDETESFWLMRNDLRRERKLPGYFDREVYDILDSPSVAVAAAAAAAATVLPMAVSVSEAVGDDFDREVYDILDSPSVAVAAAAAAAATVLPMAVSVSEAVGDEEVHIYDSNRKVSGEDGLFSDFEKDEVLVSSKDVHVPSPVPISEKQFLPPLSRCQGEGNAQGTNNEKQPASNPEMGSTSQGERKRKRLPTDEEDESLQSQLIDVLEKNGKMLSEQLEAQNINFQLDRQHQNDTASNIVAVLDKLANALGRIADKL* 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g4327 377 MobiDBLite consensus disorder prediction 301 316 - -
Psa3g4327 377 PANTHER MYB/SANT-LIKE DNA-BINDING DOMAIN PROTEIN 1 182 - -
Psa3g4327 377 PANTHER MYB/SANT-LIKE DNA-BINDING DOMAIN PROTEIN 184 377 - -
Psa3g4327 377 Gene3D - 45 112 - -
Psa3g4327 377 MobiDBLite consensus disorder prediction 278 300 - -
Psa3g4327 377 Pfam Myb/SANT-like DNA-binding domain 44 130 IPR044822 -
Psa3g4327 377 MobiDBLite consensus disorder prediction 262 320 - -
Psa3g4327 377 ProSiteProfiles Myb-like domain profile. 37 107 IPR001005 -
Psa3g4327 377 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASR3 1 182 - -
Psa3g4327 377 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASR3 184 377 - -
Psa3g4327 377 MobiDBLite consensus disorder prediction 1 44 - -
Psa3g4327 377 CDD GT1 43 114 - -
Psa3g4327 377 MobiDBLite consensus disorder prediction 1 34 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g4327 Psa-Chr3 405829022 405831836 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g4327 44 115 Trihelix Transcription Factor Family AT1G33240 34.667 8.47e-07 48.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Psa3g4327 Myb_DNA-bind_4 4.6e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g4327 - - cam:101510442 568.54