Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g4319 ATGACCATGGTTCCTTCTCAAAGCAACAAAACTAATGGTGATTATGTTTTCTACAACAATACAACAAGTGATATGAACCACTTTCAATTTGTTGAAGATTACAACAACTACAATAATAATTGTTTAAGATCTGAATTTTTGTTCAAGCACATGGCTGAACAAGAGGAATCGTTTTCGAGACTCAACGCTCGTCGTCATAACGAACCCGAACTCGAACCCGAACCTGAACCCGAAGGAGAAACTATTTCTACCTCAAAGGAAAACGAAGAACAAGAAAGAGAATCAAACAACAACAATAACACCAACAACTGGCTTCAATTAAGCATAGGTAACACCGTCGTGAGAACAACAACTACAAAACACGACGCTGATGAGACTCAAGCTCCAACAAATCTGTTGGAGCTTGAGTTGTTATCACGCCCTGATTTAGAGCAACCTTCTATCAGAGGTTGCTCTACTTTTAATTCTTCAATGTTTTTCGAACAAACAACACCGTCTTCTTCTTCATCGTCCGTGTCCATATCAATGTCCATGCCAGCCGGGCCAAGTTATAGTCATCAACAACATCTAGTTCCACATAACTGGTCATTTGGTCCATTACTACCACATTCTATGGCAATTATGGCTTCTTCTACATCTTACATTCCATCTTCTTCTTCCTCGCAATCTTGTTCTTCTTTAAGACCTAATTATTATCCTCAATATCATCATGCATCACCTTTTCATTTTCCTTCATCTTCTTCTTCTTCTGGATTTGATCAATTTGATATTGCTGGACCTAGCTCATCATCTCATCTCACTTTTCGAGTCGTCGATCCTCCTCGTCGACCTCATTCCGGAATATGGTTTATGCTACAAGCCTCACAAAATCAAGTGAAAGAACCATTTTTGCCTCAAATACCTAAGAACTATCTTAGAATCAAAGATGGAAGAATGACAGTTAGGTTGCTCATGAAGTATCTGGTTAACAAACTCAAATTGGAGAGCGAATCAGAGATAGAGATAACATGCAAAGGACAACAACTTTTACCTTTCTTGACGTTGCAACATGTGAGGGATAATATTTGGACACCAAGGGACACAACAACAACACCTTTGCTTTCAGATTCCTCAACAACTGATCATGTAATGGTGCTTCACTACTCTAGAAGCACTTCTTGA 1161 0.3893 MTMVPSQSNKTNGDYVFYNNTTSDMNHFQFVEDYNNYNNNCLRSEFLFKHMAEQEESFSRLNARRHNEPELEPEPEPEGETISTSKENEEQERESNNNNNTNNWLQLSIGNTVVRTTTTKHDADETQAPTNLLELELLSRPDLEQPSIRGCSTFNSSMFFEQTTPSSSSSSVSISMSMPAGPSYSHQQHLVPHNWSFGPLLPHSMAIMASSTSYIPSSSSSQSCSSLRPNYYPQYHHASPFHFPSSSSSSGFDQFDIAGPSSSSHLTFRVVDPPRRPHSGIWFMLQASQNQVKEPFLPQIPKNYLRIKDGRMTVRLLMKYLVNKLKLESESEIEITCKGQQLLPFLTLQHVRDNIWTPRDTTTTPLLSDSSTTDHVMVLHYSRSTS* 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g4319 386 Gene3D - 274 382 - -
Psa3g4319 386 PANTHER RING FINGER PROTEIN 1 383 IPR044171 GO:0007275
Psa3g4319 386 MobiDBLite consensus disorder prediction 79 94 - -
Psa3g4319 386 MobiDBLite consensus disorder prediction 59 103 - -
Psa3g4319 386 PANTHER RING FINGER PROTEIN 1 383 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g4319 Psa-Chr3 404669452 404680616 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g4319 294 382 C3H Transcription Factor Family AT3G23060 38.947 2.29e-08 53.9