Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g4292 ATGTTACTTGTATGCTTAAAAGTATGTCCATTTTTGGCATTGCAGAACTTTTGTTCAAAGGAGGACACTATTTTTTGTGGTGTTTTTGATGGCCATGGACCTTATGGCCATAGGGTTGCAAAAAAAGTTAGGGATTCTTTCCCTTTAAAGCTTGGTGCACAATGGGATTTGCATCTTAAGAATGAAGATGGATTCAGTAATCAAAATGGTGCTGCCACAAGTTATAATTCTGAAGAGCAAATTAGACAGGTCGGCAAGAACTTTGATCTTGAGCTCGATGGATCAAATACTATCTTGGCATTAAGAGAATCCTTTTTGAAGGCTAGCAAGATTATGGACAAAGAACTGAAACTGCATCGTGATATTGATTGCTTTTGCAGTGGGACTACAGCAGTTACCTTGATCAAGCAGGGGCTGAATCTTGTTATTGCAAATGTGGGGGATTCAAGAGCTGTATTGGGAACCCGAGATCATGAAGATTCTCTTATTGCTGTTCAGTTGACTATTGACCTTAAGCCTAATCTTCCAAAGGAAGAAGAGAGGATTAAGCAACGTAAAGGAAGGGTGTTTTCCCTTAAGAATGAACCTGATGTGTCTCGAGTTTGGCTACCTAATTCTGATTTCCCAGGTCTAGCTATGGCACGGGCTTTTGGAGATTTTTGCCTAAAGGATGTTGGATTGATTTCTGTTCCAGATGTCTCATATCACCGCCTTACAGAGAAGGATGAATTTGTTGTGTTGGCAACAGATGGGATTTGGGATGTTTTATCAAATGAAGAAGTTGTGGAGATTGTGGCATCTGCACCGCAGTCTACTGCTGCTCGATTACTGGTTGAGTCAGCTGTTCATGCTTGGAGGACAAAATTTCCTTTCTGTAAGGTTGATGATTGTGCTGCAGTGTGCCTCTTCCTCAATTCTGATTCTGAGTCGAAGGCAGAAGATACCCCAGACAAGTTGATGCCAGATGCAACAACCGACCCAGTTGATCAATCATCTCTATGTAGTGAGAACGGAATTGAAGCGGAAGCTGAAAAACTGCAGTGA 1044 0.4157 MLLVCLKVCPFLALQNFCSKEDTIFCGVFDGHGPYGHRVAKKVRDSFPLKLGAQWDLHLKNEDGFSNQNGAATSYNSEEQIRQVGKNFDLELDGSNTILALRESFLKASKIMDKELKLHRDIDCFCSGTTAVTLIKQGLNLVIANVGDSRAVLGTRDHEDSLIAVQLTIDLKPNLPKEEERIKQRKGRVFSLKNEPDVSRVWLPNSDFPGLAMARAFGDFCLKDVGLISVPDVSYHRLTEKDEFVVLATDGIWDVLSNEEVVEIVASAPQSTAARLLVESAVHAWRTKFPFCKVDDCAAVCLFLNSDSESKAEDTPDKLMPDATTDPVDQSSLCSENGIEAEAEKLQ* 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g4292 347 MobiDBLite consensus disorder prediction 309 347 - -
Psa3g4292 347 Gene3D - 12 315 IPR036457 -
Psa3g4292 347 Pfam Protein phosphatase 2C 65 277 IPR001932 -
Psa3g4292 347 PANTHER PHOSPHATASE 2C FAMILY PROTEIN 12 311 - -
Psa3g4292 347 SUPERFAMILY PP2C-like 13 305 IPR036457 -
Psa3g4292 347 SMART PP2C_4 1 302 IPR001932 -
Psa3g4292 347 PANTHER ALPHABET, ISOFORM E-RELATED 12 311 - -
Psa3g4292 347 ProSiteProfiles PPM-type phosphatase domain profile. 1 304 IPR001932 -
Psa3g4292 347 CDD PP2Cc 11 304 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g4292 Psa-Chr3 403681823 403686984 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g4292 11 308 PP2C-type Phosphatase Gene Family AT1G16220 59.211 1.18e-124 365
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g4292 - - gmx:100810538 529.25