Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g4285 ATGAAGACTTCCCACCACATTTCCTTAACACTTTTCACAATACTTCTAATCTCATCACTCTCCAATCTCCAAACTTGCTTCGCAAACAACGATAACATAAACATTCAATTAAACGACGATGTACTCGGCCTAATGGTGTTCAAATCCGATCTCGATGACCCTTCATCTTCCCTCTCGTCATGGAATGAAGATGATATCAATCCATGTTCATGGCGATACGTGAAATGCAATAAAGAAAACGGGAGAGTTTCTGAACTTTCTCTAGATGGTTTGAACTTATCAGGTAAAATTGGAAGAGGACTTGAAAAGTTGCAACACTTAGAAGTGTTGCAACTTTCTCATAACAATTTGAGTGGAACTATTAGTCCTTCACTCAAACTTTCAAGCACACTTCAAACTCTTAACCTTAGTCACAATTCAATCTATGGTGAATTACCTAACTCGTTCATCGATATGAGCTCGATGCGATTCATCGATCTATCCTATAATTCATTCGCGGGACAAATGTATGATGGTTTTTTCGCGAATTGTTCTTTCCTTCGGCGCGTTTCTTTCGCTATGAACTTGTTTGAAGGACAGATTCCTAGTACAATATCTAAGTGTTCTTTGGTGAATAGTGTTGATTTTTCGAATAATCACTTTAGTGGAAATGTTGATTTTGCTAGGGTTTGGTTATTGAATAGGCTTAGGAATTTGGATCTGTCAAACAATGCTTTATCTGGAAACTTGGTTGATGGAGTTTCAAGTTTGCATAACTTGAAAGAGTTGTTGCTTCAGAATAATCACTTTTCAGGTAATTTACCAAAGGATATTGGGTTTTGTGTTCATTTGGATAGAATTGATTTTGGTAATAATCAGTTTAGTGGGGAATTGCCTGAATCATTTGGGAGATTAAGCTATTTGAGATATTTTAGGGTTTCAGATAATCACTTATTTGGTGAATTTCCTCAATGGATTGGTAACTTGATAAGTTTGGAAGTTTTGGACTTATCTAATAATCAATTCTATGGAAACATTCCTTTGTCATTGGTTGCATGCTTGAAGTTATCTAAGGTTTATCTTAGAGGGAATGGTTTGAATGGTACTATACCTGAGGGCTTGTTTGGATTAGGGTTAGAGGAAATCGATTTTTCGCGTAATGGACTAATCGGTTCGGTTCCGGCTGGATCGAACAGGTTGTTAGAAACTCTTACGAAGCTGGATCTTTCGGTGAATCGTCTAAAAGGGAATGTTCCTGCAGAAATCGGGCTGCTTTCGAAGCTGAGATACTTGAATTTTTCTTGGAATGATCTTGATTCTCAGATTCCGCCTGAATTCGGTCTACTTCAGAATCTAGAGGTTTTGGATCTGCGTAATTGCGCGTTGTATGGTTCGATTCCGGAGGATATATGTGATTCGGGAAATTTGGATGTTCTTCAGCTGGATGGAAATTCATTGAAGGGCTCTATTCCAGAAGATATTGGGAATTGCTCATCTCTTTACTTGTTGAGTTTGTCATTCAATAATTTGACAGGTTCAATCCCGAAGTCGATTTCAAATCTAAATAAGCTCAAAATCCTCAACTTGGAATTCAATGAACTTAGCGGAGAGCTACCGATGGAGCTCGGAAAGCTTCAGAGTCTTCTTGCTGTGAACATATCACACAACAGCCTCACCGGAAGGCTTCCGGTCGGTAGCATATTTCAAAACTTAGACAAAAGTTCTTTGGAAGGAAACTACGGTCTTTGCTCGCCCTTGTTGAAAGGTCCGTGTAAAATGGATGTACCGAAACCTCTAGTTCTTGATCCACATGGCTTTGACAACCAAATGAATCCTCGAACACCGAGAAACGAATCGTCTGAGTCAAGCGGTTCGATTCATCACCACAGGTTCCTTAGTATTTCGGCGATTATAGCAATTGCGGCTTCGTTTGTGATTGTATTAGGAGTTATTGCTATTAGTCTTCTTAACGCTTCGGTAAGGAGAAAGCTAGCGTTTGTGGAGAATAATTTGGAAAGTATGTGTTCGAGTTCTTCAAAATCGGGAGCATTACCACCCACAGGTAAACTCGTTCTTTTTGATTCTCAATCCTCGCAAGATTGGATCACTAATCCGGAAAACTTGCTCAGCAAGGCATCTGAGATTGGCGAAGGAGTGTTTGGAACAGTTTATAAAATTCCGTTAGGATCGCAACAAGGAAGGAATGTCGCAATCAAGAAGCTCGTCTCGTCAAACATACTTCAATTTCCGGAAGATTTCGACAGAGAAGTTAGAATTCTAGGCAAAGCCAGACACCCGAATTTGATAGCATTGAAAGGATACTATTGGACTCCTCAACTTCAGCTTTTAGTATCCGAATTCGCACCACACGGTAACTTGCAATCCAAGTTACACGAAAAGCTTCCTTCGAGTCCTTCACTTTCTTGGCCTAACCGATTCAAGATTTTACTCGGAACAGCGAAGGGACTCGCGCATTTGCACCATTCATTCCGGCCACCAATCATTCACTACAACATAAAACCAAGCAACATCTTACTCGACGAGAACTTCAACGCGAAGATATCCGATTTCGGGTTAGCCAGGCTTTTAACAAAGCTAGACAAGCATGTGATGAGCAACAGGTTTCAAAGTGCGTTAGGTTACGTGGCGCCTGAATTAGCCTGTCAGAGCTTAAGGGTCAACGAGAAATGCGACGTGTACGGTTTTGGCGTGATGATACTCGAGTTAGTGACGGGTAGGAGGCCGGTGGAGTACGGCGAAGACAATGTGTTGATATTGAATGATCATGTGAGGGTTTTGCTTGAACATGGTAATGTTTTGGAGTGTGTGGATCCAAGTTTGATGAATGAGTATCCTGAGGACGAGGTTTTGCCGGTTTTGAAGCTGGCAATGGTGTGTACATCGCAAATACCGTCTAGCCGGCCGACGATGGCCGAAGTTGTGCAAATATTGCAGGTCATTAAAACTCCGGTTCCTCAAAGGATGGAAGTGTTTTAA 2976 0.4086 MKTSHHISLTLFTILLISSLSNLQTCFANNDNINIQLNDDVLGLMVFKSDLDDPSSSLSSWNEDDINPCSWRYVKCNKENGRVSELSLDGLNLSGKIGRGLEKLQHLEVLQLSHNNLSGTISPSLKLSSTLQTLNLSHNSIYGELPNSFIDMSSMRFIDLSYNSFAGQMYDGFFANCSFLRRVSFAMNLFEGQIPSTISKCSLVNSVDFSNNHFSGNVDFARVWLLNRLRNLDLSNNALSGNLVDGVSSLHNLKELLLQNNHFSGNLPKDIGFCVHLDRIDFGNNQFSGELPESFGRLSYLRYFRVSDNHLFGEFPQWIGNLISLEVLDLSNNQFYGNIPLSLVACLKLSKVYLRGNGLNGTIPEGLFGLGLEEIDFSRNGLIGSVPAGSNRLLETLTKLDLSVNRLKGNVPAEIGLLSKLRYLNFSWNDLDSQIPPEFGLLQNLEVLDLRNCALYGSIPEDICDSGNLDVLQLDGNSLKGSIPEDIGNCSSLYLLSLSFNNLTGSIPKSISNLNKLKILNLEFNELSGELPMELGKLQSLLAVNISHNSLTGRLPVGSIFQNLDKSSLEGNYGLCSPLLKGPCKMDVPKPLVLDPHGFDNQMNPRTPRNESSESSGSIHHHRFLSISAIIAIAASFVIVLGVIAISLLNASVRRKLAFVENNLESMCSSSSKSGALPPTGKLVLFDSQSSQDWITNPENLLSKASEIGEGVFGTVYKIPLGSQQGRNVAIKKLVSSNILQFPEDFDREVRILGKARHPNLIALKGYYWTPQLQLLVSEFAPHGNLQSKLHEKLPSSPSLSWPNRFKILLGTAKGLAHLHHSFRPPIIHYNIKPSNILLDENFNAKISDFGLARLLTKLDKHVMSNRFQSALGYVAPELACQSLRVNEKCDVYGFGVMILELVTGRRPVEYGEDNVLILNDHVRVLLEHGNVLECVDPSLMNEYPEDEVLPVLKLAMVCTSQIPSSRPTMAEVVQILQVIKTPVPQRMEVF* 992
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g4285 991 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 7 342 - -
Psa3g4285 991 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 324 989 - -
Psa3g4285 991 Pfam Protein kinase domain 704 975 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa3g4285 991 Gene3D Transferase(Phosphotransferase) domain 1 782 988 - -
Psa3g4285 991 SUPERFAMILY L domain-like 52 384 - -
Psa3g4285 991 SUPERFAMILY L domain-like 297 569 - -
Psa3g4285 991 PRINTS Leucine-rich repeat signature 229 242 - -
Psa3g4285 991 PRINTS Leucine-rich repeat signature 322 335 - -
Psa3g4285 991 Pfam Leucine rich repeat 106 164 IPR001611 GO:0005515
Psa3g4285 991 Pfam Leucine rich repeat N-terminal domain 38 77 IPR013210 -
Psa3g4285 991 SMART LRR_typ_2 104 128 IPR003591 -
Psa3g4285 991 SMART LRR_typ_2 250 274 IPR003591 -
Psa3g4285 991 SMART LRR_typ_2 322 346 IPR003591 -
Psa3g4285 991 SMART LRR_typ_2 418 441 IPR003591 -
Psa3g4285 991 SMART LRR_typ_2 467 490 IPR003591 -
Psa3g4285 991 SMART LRR_typ_2 442 466 IPR003591 -
Psa3g4285 991 SMART LRR_typ_2 514 538 IPR003591 -
Psa3g4285 991 Gene3D Ribonuclease Inhibitor 220 459 IPR032675 -
Psa3g4285 991 Gene3D Ribonuclease Inhibitor 460 586 IPR032675 -
Psa3g4285 991 Gene3D Ribonuclease Inhibitor 36 219 IPR032675 -
Psa3g4285 991 ProSiteProfiles Protein kinase domain profile. 702 980 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa3g4285 991 Gene3D Phosphorylase Kinase; domain 1 685 781 - -
Psa3g4285 991 ProSiteProfiles Leucine-rich repeat profile. 106 128 IPR001611 GO:0005515
Psa3g4285 991 CDD STKc_IRAK 708 978 - -
Psa3g4285 991 SUPERFAMILY Protein kinase-like (PK-like) 692 981 IPR011009 -
Psa3g4285 991 ProSitePatterns Protein kinases ATP-binding region signature. 708 733 IPR017441 GO:0005524
Psa3g4285 991 PANTHER BNAA09G02190D PROTEIN 7 342 - -
Psa3g4285 991 PANTHER BNAA09G02190D PROTEIN 324 989 - -
Psa3g4285 991 Pfam Leucine Rich Repeat 420 439 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g4285 Psa-Chr3 403141011 403144968 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g4285 7 988 Receptor kinase-like Gene Family AT3G28040 60.985 0.0 1177
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-1 Psa3g4285 Pkinase 9.9e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g4285 - - pvu:PHAVU_008G017400g 1429.85