Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g4278 ATGGATTCTTCTGTGTTGACCTCTCACTTTAATCACTTTCGAACCACCGCGAATTCGTTTCTATCTCAATACGAACCTCTCGTTCTGATTATCGTGCCGCTTTTCACTCTCTTTATCGCTAACGTAGTTCGTTCGTTTTTCGAAATTTTTCGTGATAAAGGAGTCAAAGCTACTCTCCTAGGGTTCTTCATGAACTTCATCAAATTGATACCTGGTGTGAAGAGTTATATAGATGCTGAAAAACAGAAGGTTGTGGATAAGTTGCAGTCTGATGGTAAATCTAAAAGAGATGGTTGGAAGACAGAGTTACCAAGCGCGGGGTTGGGCACATCTGTCCTTGAGAAGATGAAAGAAGAGAAAAAAAATGATGCAGTTTGGCAAGGCAAATGCTCTGGTACAGTCTACATTGGAGGAAGTGAGTCTAGTGAACATTTTTCTGTCATAAATGAGGCCTGCTCAATGTTTGCACATACCAACCCCTTGCATTTGGATGTATTCCAGAGTGTTGTACGCTTTGAGGCAGAAGTGGTTGCAATGACAGCGGCACTTCTTGGTAGTAAAGAAAAGGCATCCGGAGGACAAATATGTGGAAACATGACATCGGGAGGGACTGAAAGTATATTATTAGCTGTTAAATCATCTCGCGACTATATGAAATCCAAAAAAGGAATTACAAGACCAGAAATGATAATTCCTGAGTCTGGTCACTCAGCATATGACAAAGCTGCACAGTATTTTAACATAAAACTATGGCGTGTTCCAGTTAACAAAGATTTTCAAGCAGACGTGAAAGCAATTCGTCGTTATATTAACAAAAATACCATTTTGATTGTTGGATCTTCTCCCGGGTTTCCTCATGGGATAATAGACCCCATTGAAGAACTTGGTCAACTAGCATCAAGCTTTGGCATTTGTTTCCATGTGGACCTTTGCCTCGGTGGCTTCGTATTACCTTTTGCTCGCGAGCTTGGGTACCATATTCCACCTTATGATTTTTCTGTTAAAGGTGTTACTTCAATATCAGTAGATGTGCATAAATATGGGTTAGCTCCCAAAGGAACAAGTACCGTTCTATATAGGAACCATGAAATCAGAAAGAATCAATTTGTTGCCGTTACTGAGTGGTCTGGTGGGTTGTATGTATCTCCAACCATAGCTGGAAGTAGACCTGGAAGCCTTATTGCTGGTGCATGGGCAGCAATGATGTCTCTAGGGAAAGAAGGTTACTTGAAACATACCAAAGCAATTATGGAAGGATCAAAGAGACTACAAAAAGGCATAGAGGAGATATCTGAGTTGTTTATCATTGGAAGACCCGATATGACAATCATAGCTTTTGGATCCAAAGTTCTAGATATATTTGAGGTCAACGATATCATGTCATCCAAAGGTTGGCATTTGAATGCATTGCAGAGACCCAACAGCATCCATATCTGTGTGACACTGCAACATGTACCAATTGTTGATGACTTTATAAGGGATTTAAAAGAATCTGTGGAAACCGTGAAACAAAATCCGGGTCCAATAAGTGGAGGACTTGCGCCTATATATGGGGCGGCCGGGAAGATGCCCGATAGAGGAACGGTTCAGGAATTGCTGGTAGATTATATGGACGGTACATGCTAG 1626 0.4114 MDSSVLTSHFNHFRTTANSFLSQYEPLVLIIVPLFTLFIANVVRSFFEIFRDKGVKATLLGFFMNFIKLIPGVKSYIDAEKQKVVDKLQSDGKSKRDGWKTELPSAGLGTSVLEKMKEEKKNDAVWQGKCSGTVYIGGSESSEHFSVINEACSMFAHTNPLHLDVFQSVVRFEAEVVAMTAALLGSKEKASGGQICGNMTSGGTESILLAVKSSRDYMKSKKGITRPEMIIPESGHSAYDKAAQYFNIKLWRVPVNKDFQADVKAIRRYINKNTILIVGSSPGFPHGIIDPIEELGQLASSFGICFHVDLCLGGFVLPFARELGYHIPPYDFSVKGVTSISVDVHKYGLAPKGTSTVLYRNHEIRKNQFVAVTEWSGGLYVSPTIAGSRPGSLIAGAWAAMMSLGKEGYLKHTKAIMEGSKRLQKGIEEISELFIIGRPDMTIIAFGSKVLDIFEVNDIMSSKGWHLNALQRPNSIHICVTLQHVPIVDDFIRDLKESVETVKQNPGPISGGLAPIYGAAGKMPDRGTVQELLVDYMDGTC* 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g4278 541 Pfam Pyridoxal-dependent decarboxylase conserved domain 161 447 IPR002129 GO:0016830|GO:0019752|GO:0030170
Psa3g4278 541 Gene3D - 138 405 IPR015421 GO:0003824
Psa3g4278 541 Gene3D - 102 538 - -
Psa3g4278 541 PANTHER SPHINGOSINE-1-PHOSPHATE LYASE 1 21 541 - -
Psa3g4278 541 PANTHER - 21 541 - -
Psa3g4278 541 SUPERFAMILY PLP-dependent transferases 81 505 IPR015424 -
Psa3g4278 541 Gene3D Aspartate Aminotransferase, domain 1 110 504 IPR015422 GO:0003824
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g4278 157 501 Calmodulin-binding Proteins AT3G17760 26.230 6.84e-24 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g4278 K01634 - gmx:100794743 961.829