Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g4264 ATGCATCCTTCAAGAATGGTGACCAATTTAAAAGTGATGGTAATGGCGTTCCTTTTTTGCATTCCTTTCGTTGTACAACCGGTGTCAAATCATGTCTCATTTAAAGAGGAGCTTCCAACGTGGGTGGAAGAAAAAGACACCATGTTGCTCACAAATGATGATATTCATGTTGATATTGTTGTTGTTGGTGATGGTTCGGGAAATTTCGTTAAAGTTATGGACATGGTGTTAGCAGCACCAAAGCATAGCAAGAAACGTTTTGTGATAAAAGTCAAGAGGGGGATTTACATGGAAAATGTGATTATTGGTGCGGATAAGTCGAACCTCGTGCTTATTGGAGACGGAATGGATGTTACAGTTATTTCTGGTAATTTGAGTCACTGCCAAAACAACTTGACTACGTACACGACATCTACCTTTGGTAAGGAAATTAATAAGCTCGGGTAG 447 0.396 MHPSRMVTNLKVMVMAFLFCIPFVVQPVSNHVSFKEELPTWVEEKDTMLLTNDDIHVDIVVVGDGSGNFVKVMDMVLAAPKHSKKRFVIKVKRGIYMENVIIGADKSNLVLIGDGMDVTVISGNLSHCQNNLTTYTTSTFGKEINKLG* 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g4264 148 Gene3D - 52 146 IPR012334 -
Psa3g4264 148 PANTHER PECTINESTERASE 26 141 - -
Psa3g4264 148 PANTHER PECTINESTERASE/PECTINESTERASE INHIBITOR 44-RELATED 26 141 - -
Psa3g4264 148 Pfam Pectinesterase 58 143 IPR000070 GO:0030599|GO:0042545
Psa3g4264 148 SUPERFAMILY Pectin lyase-like 57 140 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g4264 Psa-Chr3 401165393 401165839 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g4264 31 141 Carbohydrate Esterase AT3G43270 49.107 4.87e-28 106
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g4264 K01051 - gmx:100810815 122.479