Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g4255 ATGGCTGGGAAGGTAGCGAAGGCAGCTTACGATGCGAAGATGGGAAAACTTCTTCGAGAGTACACTCAAGTTTTGGTGGTTTCAGCTGACAATGTTGGATCAAACCAGCTTCAGGGTATAAGAAGGACACTGCACGAAGATTCAGTGGTAGTGATGGGGAAGAACTCATTGATGAAACGCTCTATTATCCAAGAAGCGGAGAAAACTGGGAACAACAACGCTTTCCTTAATCTTGTTCCACTCCTTGTGGGGAATGTTGCCTTGATCTTTACCAAAGGTGACTTGAGGGATGTTAGTGAACGGATTGCCAAGCTCAAGGTTGTTAATCCTATTCTCATGTGCCCTAAGTATAGGTCATATGACTCGTACAAAACTTGTTCCTATATGCAAACCGGACAATTGCCATTGGGCCTCACGTGTTGTAACCAACAATCATCTCAAGCTTCCGAGCCTTTTCTTGTAAGCTCAAAATTCTCGCCACCTCAACACTGTTACTTGTCGAGATCGAGACAGCTCTTGGCGACAAGTATATGGTCTCCATTTCTTCTTTTGGCTGGTAATTTGTGA 567 0.4427 MAGKVAKAAYDAKMGKLLREYTQVLVVSADNVGSNQLQGIRRTLHEDSVVVMGKNSLMKRSIIQEAEKTGNNNAFLNLVPLLVGNVALIFTKGDLRDVSERIAKLKVVNPILMCPKYRSYDSYKTCSYMQTGQLPLGLTCCNQQSSQASEPFLVSSKFSPPQHCYLSRSRQLLATSIWSPFLLLAGNL* 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g4255 188 PANTHER RIBOSOMAL PROTEIN L10P-RELATED 1 187 - -
Psa3g4255 188 SUPERFAMILY Ribosomal protein L10-like 7 107 IPR043141 -
Psa3g4255 188 Gene3D - 3 122 IPR043141 -
Psa3g4255 188 Pfam Ribosomal protein L10 6 104 IPR001790 -
Psa3g4255 188 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN P0 1 187 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g4255 Psa-Chr3 400383247 400385967 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g4255 1 110 Cytoplasmic Ribosomal Protein Gene Family AT2G40010 62.281 1.18e-38 133
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g4255 K02941 - jre:108980032 143.665