Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g4248 ATGGAGTCGAAACACGAAGCGTCGAGTGTGATTTTAAAATTGATGGGACTTGATAAAGTGGCTTCCCGATATGAACCTGTTAGAGATAGACCGAAAGTTTTGTCGGAGGATTATTTGCAGAAAGTTTCTTCTATTGGTGTTAGAAGGAAGCGTTCTTCTCGTCAGTATGGTTCATTAGAAATGAGTACTGATGAGAAGGACGGTTCTGACGATGTTTTGATGGTGGTGGAAACATCAGTAAGGAGAGATAAGAACCATAACTCGTCGAAGGGAAATGGAAAAGAGAATTTATCGTTCTCTCGAGCTAAGGTAGAAGATGTGCCACAGGAAACGGGTATAAAATCTGGGGAAGGAAATTTGCTGCTTCGACAGAAAACGGATAATAGGTCGCGAAGTGTTGTGCATGCAAAAGATGGATTGAATGAAACGTTTCGGTTTTCGAAATTTCAATTGGATCAGAAGGATTTAACTTTTGACTCAAGATTTTCTGTTTTGAAAGCGAATCCTGAAAAGGAAGGAAATGGTAAGATTAAAAGCAACATTAGATGTAAGGTTGGGTTCGGTTATAGCTTTTCCAGAAACGTGCCAACGACAAAAAGGCTTGCTGATAATCGTGGAACTATGACTAAGGATGACTTATTTCAGAAATATTGGGGTTTAAGTAAGAACGTGTCCGCAAATCGATCAACCGAGAAGTCAGAAGATATGAACTTAAAGTTGAAGAAGAGATGTTATGGAAACAATTTGTTCGAAAAGGAACCAATGCTTTCTCAATTGTCAAGCTCTGATACTTCTGCTTTTGTAGACAGTCTAATCTTGCAACAGACAGACTTAATGAACGGAGACGTGAAGAACAACGAAGACAGTAACATGTCTGAGAAAATTGTCTTCTCTCTTGATTCATCAGTTGATTTCTTGGTTTCTGATGTGAAGACTAAGGTTGTTGGTTACTCTGATAATAGTCCAACCACGAAGCAATCTGAATCAACGGCATCTGTAAGTCATGCTTCAAAACAACAGGAAACATTGGAATTTCAAGAAGATTCTGTTTATTCAGTTTCCTCCGGGGCTGATGCAGATTCTGTCAGTAACTTCCTCGAGGGATATGAACCTAGTCCAATTTCAGTTTTGGACTCCACATTTAGCGAAGTAGACATTTCAATTATATCTGAATACAGTGCTGATGGTGCATATGATTCCTCTGAAGTTGACGATGAAGAACTTGATTTGAATGTTTCAAGTGATGAAGATTGCGGGAAAGAGTGTATAGCCGATTTCGAAGTGAAGAGAGATATAGTAGGCTTATCTAGAACAGAAGAAAGTAGAGACTTCTCCTATGTTGTCGAGGTCTTAACCGAAGCAGGTATATCTAATGCGAGCTTGTTCAGAGATTTTTCAACATGGCACTCTGCGGAATGTCCTATTAGCCCTTCCATCTTCAACACCCTAGAAAAGAAATTTGGCGAGCAACAACTTTGGAAAAGATCTGAAAGGCGGCTTCTTTTCGATCGTATTAATTTAGGTTTGTTAGATATTCTACATCCATATCTATACATTCCAGTGTGGGAAATGCCTGTGTCAAGAAGATTGAACACTGAATTAAGACCAGATATGATTGAGGATGAGATGTGGGAATTGCTTGTTTCGCAAGAAAAGAAAGCTGGAAAGGAGTCGATAGACGATATGCTTGGAGGGGAAATTCGGTGGATAGAATTAGGCGAAGATGTTGAAGGTTTTGTTAGGGAGGTAGTTAAGGTGTTAATAGAGGAGCTTGTAGATGATATAGTTAGGTTAGAGAATATTTGA 1806 0.3915 MESKHEASSVILKLMGLDKVASRYEPVRDRPKVLSEDYLQKVSSIGVRRKRSSRQYGSLEMSTDEKDGSDDVLMVVETSVRRDKNHNSSKGNGKENLSFSRAKVEDVPQETGIKSGEGNLLLRQKTDNRSRSVVHAKDGLNETFRFSKFQLDQKDLTFDSRFSVLKANPEKEGNGKIKSNIRCKVGFGYSFSRNVPTTKRLADNRGTMTKDDLFQKYWGLSKNVSANRSTEKSEDMNLKLKKRCYGNNLFEKEPMLSQLSSSDTSAFVDSLILQQTDLMNGDVKNNEDSNMSEKIVFSLDSSVDFLVSDVKTKVVGYSDNSPTTKQSESTASVSHASKQQETLEFQEDSVYSVSSGADADSVSNFLEGYEPSPISVLDSTFSEVDISIISEYSADGAYDSSEVDDEELDLNVSSDEDCGKECIADFEVKRDIVGLSRTEESRDFSYVVEVLTEAGISNASLFRDFSTWHSAECPISPSIFNTLEKKFGEQQLWKRSERRLLFDRINLGLLDILHPYLYIPVWEMPVSRRLNTELRPDMIEDEMWELLVSQEKKAGKESIDDMLGGEIRWIELGEDVEGFVREVVKVLIEELVDDIVRLENI* 602
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g4248 601 PANTHER AFADIN 1 171 - -
Psa3g4248 601 PANTHER AFADIN 120 600 - -
Psa3g4248 601 MobiDBLite consensus disorder prediction 46 117 - -
Psa3g4248 601 MobiDBLite consensus disorder prediction 319 340 - -
Psa3g4248 601 PANTHER DUF4378 DOMAIN PROTEIN 120 600 - -
Psa3g4248 601 PANTHER DUF4378 DOMAIN PROTEIN 1 171 - -
Psa3g4248 601 MobiDBLite consensus disorder prediction 60 90 - -
Psa3g4248 601 Pfam Domain of unknown function (DUF4378) 443 594 IPR025486 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g4248 Psa-Chr3 399749883 399753810 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g4248 355 596 TRM (TON1 Recruiting Motif) Superfamily AT2G39435 31.559 3.52e-29 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g4248 - - cam:101499857 698.353