Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g4241 ATGCCATGGGAAGGTTACAATTCTGAAGATGATGTACCCATTAGACAAATATTGGAATGTTCACTCGGATTAGCCGGGAGTATGCTAAATAGACATTATCGAATAACACCTTTTGATGAGAGATATGAACAAGAGGCTTCCAGAAAACTTGTGTTTTCTGAATTATATGAGGCTAGTAAACAAACATCGAATCCATGGATATTTGAACCCGAGTATCTGGGAGAGAGAAGAATATTTGATGGAAGAACACGGTTAAACAACGAGTCACATTCACGTACGATCGATGCTACTATTGAAAAAGAATCAAATTTAGAAATATTCATGGTAACCAGTCGTGTAGATGAAATTAGTCAAATTATCCGTAAACGTATTGAGCAATATAATACTAAAGTAAAAATTGTAAATACATGTATCGTACTTCAAGTAGGCGATGGCATTGCTCATATTTATGGTCTTGATGAGGTAATGACAGGTGAATTAGTAGAATTTAAAGAGGGCGCCATAGGCATTGCTTTGAATTTGGAATCAAAAAATGTTGGTGTTGTATTAATGGGTGATGGTTTGATGATACAAGAGGGAAGTTTCATAAAAGCAACAGGAAGAATTGCTCAGTTACCAGTAAGTGAGGGTTATTTGGGTCGTGTTGTAAATGCCCTAGCTAAACCTATTGACGATCGAGGAGAAATTTCAACTTCGGAATCTCGGTTAATTGAATCTCCCGCTCCCGGTATTATTTCCAGACGTTCCGTGTATGTGCCTCTTCAAATGGGACTTATTGCTATTGATTATATGATCCCTATAGGGCGTGGCCAGCGAGAATCGATTATTGGAGATAGACAAATAGGTAAAACAACAGTAGCTACAAATACGATTCTCAATCAACAGAGACAAAATATAGTATGTGTTTATGTAGCTATTGGTCAAAAAACATCTTATGTGGCTCAAGTAGTAACTACTTTACAAGAAAGAGGGGCAATGGAATACACTATTATAGTGGCAGAAACAGCAAATTCCCTAGCTACATTACAATACCTCATGCCTTATACAGGAGCAATTCTGACTGAATATTTTATGTACTGTGAACATCACACTTTAATTATTTATGATGATCCGTTCAAACACGCACAGGCTTATCGCCAAATTTATCTTCTATTACGAAGACCACCAGGTCGCGAAGCTTATTCTAGAAATGTTTTTTATTTACATTCGCGTCTTTTGGAAAGAGCCGCTAAATTAAGTTCTCAGTTAGGTGAAGGAAGTATGACTGCTTTACCAATAGTTGAGACCCAATCCAGAGATGTTTCAGCTTATATTCCTACTAATTTCATTTCCATTACAGATAGTCAAATATTCTTATCTGCCGATTTATTCAATGCTAGGATCAAACCTGCAATTAATATGG 1402 0.3659 MPWEGYNSEDDVPIRQILECSLGLAGSMLNRHYRITPFDERYEQEASRKLVFSELYEASKQTSNPWIFEPEYLGERRIFDGRTRLNNESHSRTIDATIEKESNLEIFMVTSRVDEISQIIRKRIEQYNTKVKIVNTCIVLQVGDGIAHIYGLDEVMTGELVEFKEGAIGIALNLESKNVGVVLMGDGLMIQEGSFIKATGRIAQLPVSEGYLGRVVNALAKPIDDRGEISTSESRLIESPAPGIISRRSVYVPLQMGLIAIDYMIPIGRGQRESIIGDRQIGKTTVATNTILNQQRQNIVCVYVAIGQKTSYVAQVVTTLQERGAMEYTIIVAETANSLATLQYLMPYTGAILTEYFMYCEHHTLIIYDDPFKHAQAYRQIYLLLRRPPGREAYSRNVFYLHSRLLERAAKLSSQLGEGSMTALPIVETQSRDVSAYIPTNFISITDSQIFLSADLFNARIKPAINM 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g4241 467 PANTHER ATP SYNTHASE SUBUNIT ALPHA, CHLOROPLASTIC 108 467 - -
Psa3g4241 467 SUPERFAMILY beta and beta-prime subunits of DNA dependent RNA-polymerase 14 83 - -
Psa3g4241 467 SUPERFAMILY N-terminal domain of alpha and beta subunits of F1 ATP synthase 118 202 IPR036121 GO:0046034|GO:1902600
Psa3g4241 467 CDD ATP-synt_F1_alpha_N 138 201 - -
Psa3g4241 467 TIGRFAM atpA: ATP synthase F1, alpha subunit 112 467 IPR005294 GO:0015986|GO:0045261|GO:0046933
Psa3g4241 467 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 204 466 IPR027417 -
Psa3g4241 467 Pfam ATP synthase alpha/beta family, nucleotide-binding domain 257 467 IPR000194 GO:0005524
Psa3g4241 467 Pfam ATP synthase alpha/beta family, beta-barrel domain 139 200 IPR004100 GO:0046034|GO:1902600
Psa3g4241 467 Gene3D - 110 201 IPR023366 -
Psa3g4241 467 Gene3D - 12 94 IPR037033 GO:0003677|GO:0003899|GO:0006351
Psa3g4241 467 Gene3D - 202 467 IPR027417 -
Psa3g4241 467 PANTHER ATP SYNTHASE SUBUNIT ALPHA, MITOCHONDRIAL 108 467 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g4241 Psa-Chr3 399562790 399564878 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g4241 196 467 Primary Pumps ATPases(2) AT4G38510 26.298 7.43e-22 96.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g4241 K02111 - gmx:121173224 583.563