Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g4222 ATGACACATAAAGAATTTGCATCTTCATCCTTTCCCTCAAAATCCATCTCTTCAAATTCCAACAATGATTTTTCAGGAAACAACCCTAGTATATTTTCTACGCACTCAAATAACCTTTTTTCCACCGTGGGAGGCAACAAAAAGCTCATAGTTTCGCACACCACTACCACCACCAACAATGACATATTGATGATGCCATCATCATCATCTGCACAACCATCCTTTGATAGAGATATGGATTTCCCTCAAAATCCACCTAAGAATCCTTCCAAATCCTCCTCCAAAAAACGAATGGGTAGACCCTTGGGCTCCAAGAACAGACCCAAAACACACATCATTATCGAGGAAAATAGAGAAACCTTCACAGAAGTGGTTACACTTCAGATCTCTGCTGGAGAAGATATTGTGGAAAATATAATCAAATATGCTCAACGACGTCAAACTAACATAATAGTGTCGAGGGATTTCGGTCTTATCTCTAACATTACATTTCTTGATCCTGTATCTCGTGTCCCATTATTACCCATCGAAGGACCCGTACATATGACATCTCTATTTGGAACATATATAAATCCAAATTGTGAATGTCCTCCTAGAAAATTCATAAGTCATCCACCATGTTCCTCTTTTACCATATACTTCTCTAGTCCTAATGAATATGTGTTTGGTGGAATTGTTGGTGGAAAGGTTACCGCTGCTGGTGTCATTTTGATTAATGCTACTCTTGTTCGGAAAACAACATTTCATAGGGAGGTATCATCCAATAAAAATGTTCGAGAAATTGAAGAGGGAGTACCAACATATGCTGTTGGTGTCCTCACCAATGTTAATTAG 834 0.3849 MTHKEFASSSFPSKSISSNSNNDFSGNNPSIFSTHSNNLFSTVGGNKKLIVSHTTTTTNNDILMMPSSSSAQPSFDRDMDFPQNPPKNPSKSSSKKRMGRPLGSKNRPKTHIIIEENRETFTEVVTLQISAGEDIVENIIKYAQRRQTNIIVSRDFGLISNITFLDPVSRVPLLPIEGPVHMTSLFGTYINPNCECPPRKFISHPPCSSFTIYFSSPNEYVFGGIVGGKVTAAGVILINATLVRKTTFHREVSSNKNVREIEEGVPTYAVGVLTNVN* 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g4222 277 SUPERFAMILY AF0104/ALDC/Ptd012-like 123 258 - -
Psa3g4222 277 ProSiteProfiles PPC domain profile profile. 119 264 IPR005175 -
Psa3g4222 277 Gene3D - 123 264 - -
Psa3g4222 277 MobiDBLite consensus disorder prediction 1 21 - -
Psa3g4222 277 Pfam Plants and Prokaryotes Conserved (PCC) domain 124 238 IPR005175 -
Psa3g4222 277 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 55 255 IPR014476 GO:0003680
Psa3g4222 277 MobiDBLite consensus disorder prediction 83 109 - -
Psa3g4222 277 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 55 255 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g4222 Psa-Chr3 396438291 396439392 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g4222 95 250 AT-hook Motif Nuclear Localized (AHL) Family AT5G49700 26.582 1.38e-16 75.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g4222 - - cam:101509190 194.897