Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g4213 ATGGCTTCCAACAACGACAACATTAAAATCCACAAACACCTCAAAGTTGTTCCTCCATCATCATCAACCCAAACAACAGCAACAACAATTCCTCTCACATTTTTTGACATATTTTGGCTAAGGTTTCACCCAGTAGAGAGACTTTTCTTCTACACCCTCCCTATTTCACTATCACACCCCTCTTTCTTCTTTCAAAAACTTGTTCCAATTCTCAATTCTTCACTCTCTTTAACCCTCCAACATTTTCTCCCTCTAGCTGGTAAAATCATCTGGCCTTCTGATTCTTCAAAACCATTCATCCAATTCAATCCCAATGATGATGATCATGGAGTTTCCTTACTCATTGCAGAATCTGATTCCGATTTCAATCATCTCATTCAAAACTCACCCAAAGAAGCCTCTTTGTCTCGTTCTTTTATACCGGTTTTGGAATCAACCGATGTCTTTTCTTCAATAATCTCCATTCAAATAACCCTTTTCCCAAGAAATGGTTTTTCCATCGGAATAAGCACACACCATGCCGTTCTAGATGGAAAATCTTCAACCATGTTCATAAAAGCTTGGGCTTATCTTTGCAACAAAATCATCGAAACCGAAGAATTATCACCGATATTATCACCGGAGTTCGAACCTTTACTCGATAGAGAAAGCATCAAAGACCGAGATGGACTTGGTGATACATTCATAAACAACTGGACCAAGATGTTTCCAAATGAAAAAGGAAGCGAAAGAAGCTTGAAGATTCTCATTCTCCCTTTTGAACCAAAACTCGAAGACTATGTTCGAGCTACGTTCGAGCTCAAGCGCGAAGATTTGAATAAGATAAAGGAATCAGTGTTATCCAAATGGGAGATATTCGATACAAATGAATCAAAGCCAAAGAGTATATCATCGTTTGTTCTGACTTGTGCTTATTCAGCCGTTTGTGTTGCAAAAGCGATTCACAAAATTCACGACGAGAAAGAGAAGTTTGTTTTTGGGTTAGCAGTAGATTGTAGAGCAAGGTTAGAACCACCAATGGCAAGTAACTATTTTGGTAATTGTGTTAGGATGCATTTGGTTGATACAGAACCATTGGATTTCATAGATGAAAATGGAGTGTTTTTGGTTGCAAAGTGTATTCATGAGAGCATAAAAATGATAATTGAAAATGATGTTCTTGAAGGAGTTAAAGATGGGTTTGGTAAATTGAACACTTTGAAGAATGAAGGATATGAAATTATTGGAATGGCAGGGTCTAATAAATTTGAAGTTTATGAAAGTGATTTTGGTTGGGGAAGGCCGGAAAAAGTGGAGATAGTGTCGATTGATAGAGGTTTGACAATTGGTTTAGCAGAGAGCAAAGATGGAAGAGGTGGGATTGAAGTTGGGATTGTTCTTGATAAACATGTTATGGATGTTCTTAGCACTTTGTTTCTTGAAGGACTAAGTTTCGATTGA 1440 0.3757 MASNNDNIKIHKHLKVVPPSSSTQTTATTIPLTFFDIFWLRFHPVERLFFYTLPISLSHPSFFFQKLVPILNSSLSLTLQHFLPLAGKIIWPSDSSKPFIQFNPNDDDHGVSLLIAESDSDFNHLIQNSPKEASLSRSFIPVLESTDVFSSIISIQITLFPRNGFSIGISTHHAVLDGKSSTMFIKAWAYLCNKIIETEELSPILSPEFEPLLDRESIKDRDGLGDTFINNWTKMFPNEKGSERSLKILILPFEPKLEDYVRATFELKREDLNKIKESVLSKWEIFDTNESKPKSISSFVLTCAYSAVCVAKAIHKIHDEKEKFVFGLAVDCRARLEPPMASNYFGNCVRMHLVDTEPLDFIDENGVFLVAKCIHESIKMIIENDVLEGVKDGFGKLNTLKNEGYEIIGMAGSNKFEVYESDFGWGRPEKVEIVSIDRGLTIGLAESKDGRGGIEVGIVLDKHVMDVLSTLFLEGLSFD* 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g4213 479 Gene3D - 257 479 IPR023213 -
Psa3g4213 479 Gene3D - 8 244 IPR023213 -
Psa3g4213 479 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 5 477 - -
Psa3g4213 479 PANTHER - 5 477 - -
Psa3g4213 479 SUPERFAMILY CoA-dependent acyltransferases 296 444 - -
Psa3g4213 479 Pfam Transferase family 15 468 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g4213 Psa-Chr3 396009091 396011310 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g4213 22 474 Monolignol Biosynthesis Gene Families AT5G48930 24.190 4.07e-19 87.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g4213 - - mtr:MTR_7g014620 548.125