Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g4208 ATGAATTCCGAGAACCACAAGTCCTTGATTTGGACTACTCTTGAATGGTATTCTCCATTACAGTGGTGGAGAAATCAATTAAAACCAGTCATAGACAAGTCCTCCATTGCCGTAATCAACCATCCTCAATTTCCCAGATTTCTATCTAAGAAGAAAAAGCCTCAAAGTCTAGTCAACCTTTGCATTGGAGTTCTTGGAAGACATTTGGAGGATATTATTGAAGATTTGGAAGAGATTGCTATCGACTTGCCGGGTGATATTAAGTTAGCAGTGGCAGATATTGCTAGACGAAGAAAGTTGTTGAGTGATGATGTCTTGATTGCGTTAGCTGATGCTTCCTGGGAAATCCTTGATGTCTCTGGCTCAGATGTTTCGGATTTTGGCTTGATAAAAGCAGCTGAAAGATGTAGAAAAGGCTACTTCAAATTTTACAACGATCATTGGCCATGGAGCATTTGGTTCTGTTTACAAAGCACAAATGCCTACAGGAGAACGAGAATTTTTAAAAATTTTACAACGATCATTGGCCATGGAGCATTTGGTTCTGTTTACAAAGCACAAATGCCTACAGGTGAGACGGTTGCAGTTAAAGTTCTTGGTGCTAATTCAAGACAAGGAGAACGAGAATTTTTAACTGAGGTTCTATCAAAGCTTTATCAAGAGGTGATCGTATTAGCTTGGTTCCCATTTGTTTCGGAATCCCAAACTAGACTGTTATACAGTCAAGCAATCAGTGGAGAGTTTCAAATCCGCATGAATAATCTGATGCTCGACGTCCAAAGCAAATGCAGCAACACGACTGCAACCAAACGTGAAAGCTGCAAAACACGGCCAAAAAATACAAACCGAACACGGTGCAATAGAAGGTTGAAAATGCAAATCATCCAAAACAACGGCAACGCATAA 906 0.4007 MNSENHKSLIWTTLEWYSPLQWWRNQLKPVIDKSSIAVINHPQFPRFLSKKKKPQSLVNLCIGVLGRHLEDIIEDLEEIAIDLPGDIKLAVADIARRRKLLSDDVLIALADASWEILDVSGSDVSDFGLIKAAERCRKGYFKFYNDHWPWSIWFCLQSTNAYRRTRIFKNFTTIIGHGAFGSVYKAQMPTGETVAVKVLGANSRQGEREFLTEVLSKLYQEVIVLAWFPFVSESQTRLLYSQAISGEFQIRMNNLMLDVQSKCSNTTATKRESCKTRPKNTNRTRCNRRLKMQIIQNNGNA* 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g4208 301 Gene3D Phosphorylase Kinase; domain 1 156 241 - -
Psa3g4208 301 SUPERFAMILY Protein kinase-like (PK-like) 147 218 IPR011009 -
Psa3g4208 301 ProSitePatterns Protein kinases ATP-binding region signature. 175 197 IPR017441 GO:0005524
Psa3g4208 301 PANTHER OS06G0679700 PROTEIN 42 137 - -
Psa3g4208 301 PANTHER UNCHARACTERIZED 42 137 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g4208 Psa-Chr3 395937763 395939603 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g4208 128 215 Receptor kinase-like Gene Family AT4G04510 37.500 2.58e-09 56.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-2 Psa3g4208 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g4208 - - gmx:100797026 158.688