Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g4202 ATGGTGGGTGACGACGATGCTCGAGCTCCGTGCCATCTTTCATCTAACCGGAAAATGTTTTGGCGCTCGGCGTCGTGGTCTTCTGCTCGTTCCTCCGCCGCAAACGCTTCTGGTGAACCGGAGTCCAATTTCGCTGATCCCAATTCAGGTGAAGGGAATAATACTAACCGGAGATTTCCTCCGCCTCCATTAACGCCGAGGAGCCAACAGAATTGTAAGGCCAGGTCGTCGTGTTTGCCGCCGCTTCAGCCGCTTTCGATTGCTCGGAGGAGTTTGGATGAGTGGCCGAAGGCAGGTTCGGATGATATCGGGGAGTGGCCGCAACCGCCGATTACTCCTGGTGGGAGAGGTAATGGTAATGGTTATGGTAATAGTAGTAGTATTAATAATAACAATGGTGAAAGGTTGAAACTTGATTTGTCTTCTATTCAGCAGAATAATAATCATGATAGTAGGAATAATGGTGGACTTGTGAAGAGAGATAAGATTGCATTTTTTGATAAGGAATGTTCTAAAGTTGCTGAACATGTTTATCTTGGTGGTGATGCTGTTGCTAAGGATAGGGGTATTTTGAAAAGGAATGGGATTACTCATGTTTTGAATTGTGTAGGTTTTGTGTGTCCTGAGTATTTCAAAGCTGATTTTGTGTATAGAACTTTGTGGTTACAAGATAGTCCTAGTGAGGATATAACTAGTATTTTGTATGATGTGTTTGATTACTTTGAGGATGTTAGAGAAAAGAATGGGAGGGTGTTTGTTCATTGTTGTCAAGGAGTGTCAAGGTCAACTTCTCTTGTCATTGCTTACCTTATGTGGAGGGAAGGGCAGAGTTTCGATGATGCTTTTCAGTTTGTGAAGGCGGCGAGAGGTATTGCCGATCCGAATATGGGTTTCGCTTGCCAATTGTTGCAGTGTCAGAAAAGGGTTCATGCATTTCCTCTTAGTCCTAGTTCTTTGTTGAGAATGTATAGGATTGCTCCTCACTCACCGTATGATCCTTTGCATCTTGTTCCGAAGATGTTGACCGATCCGTCTTCGTCTGCCCTTGACTCTAGGGGTGCATTTATAGTGCACATTCCGTCTGCAATATATGTTTGGATTGGAAAGAATTGTGAGGCTATCATGGAAAGGGACGCCAGAGGGGCTGCGGGTCAGATTGTCCGGTATGAGAGAGTACAAGGATCTATTATCATGATTAGGGAAGGTGAGGAACCACCTTCTTTTTGGGATGCGTTTTCGAAGTTTTTGCCTTTGATGGACTTATCTGGAAGTGTAGTAGAGAGTAGCAAAACAAGTGTTAAAATTTTTCCTGGCGAGAGAAAAGTGGATGCATACAATGTCGATTTTGAAGTTTTTGGAAAAGCCATCATGGGGGGTTTTGTGCCTCCATTTGCGTCATCAGAGAATGAACATGAAACCCATCTTCCCGCAAGAGAGAGTAGCTGGAGTGTTTTAAGGCGGAAAGATTCCTCCGTAAATGTGAAGGAGTTTGTCTCAGCCCCTAAGTTATCCTTACCCCGGGTTTATTCAGATTCCATGTTGTGTATTCATGCGTCTGCAATTTCATTTCCATCCCCGTCGGCGTCGTCAACAACATCATCTTTATCATCATCCTCTTCACCGCCTTTTGTCTCTCCAGATTCCATTTCTTCTGATTCTAGCAATCACTCAAAGTTTTTGTTAGAATTGTCACCAGATTCTTCCTCTCTAGTTGTTGCTCCTGTTCCTCCAGTATCTTCATCTTTGTCTAACTTCTCTAATTTGTCCCTCTCGTCAAATTCTACCTCTCTACCAGTGTCTAAGTATACAGATATCTATGATGTCAAATTACCAAGTCCATCTTCTCAGTCTGCCTCTTCACCGTTGAAAAAATCATCGACTTCCATTGCTGAACGCAGAGGTAGTTTATCAAAGTCTTTGAAATTGCCTCTAATGAACGATAAGACTCAAGTAACAGATAAACCATCAACTATTTGTGCTGGCCGGGAACACGGTGTTCTCGGCAACAACAACTTTAGCTGTGTACAAGATTCAGACAATATAGACTATTTGTTTGAGTCCAGCAATCATCATCATGTCAAAGACAGAGGTATGGATTCAACTCAACAAAGCGAACTGTTGTCATGTCCTGACATTATCGAAAGTGAGGGCTGCAAGGAATCATCACTTCTCAGGAACTGTGTTGAGCCTTGCGTAGATAGTTTGTCACGAGAAAATTTGAAGTCTACCGCGCCAAAGGGAACTAATGAGAGTGGCTCGTTGCAATGTACTAAGACACAAACTTTAGTATATCGCTGGCCTAGTTTAGAAAAGATCGAAACATTTGGTTCAAATCATTTGGTTTCTGAGGCTGCTTTTGTCATATTCTCTCCAAGTATACTTATGCAGGCAGGAAATGTTTTATATCTATGGGTAGGGAGTTCTTTCAAACTGGACGCATCTTCACAGGATTGGTTCGATAGTGATAGACAGTCTGATTTTCTTGGAGCAGTTGACTGGAACCGAATTGGCTGTGATCTTCTTGTTCAGTTTAATTTGCCGAAAAATACAGTTACTAAGATTGTTAAAGAGAATGAAGAACCCCAAGAGTTCCTTGCTTTGCTGAGTTCATTGTAG 2616 0.4258 MVGDDDARAPCHLSSNRKMFWRSASWSSARSSAANASGEPESNFADPNSGEGNNTNRRFPPPPLTPRSQQNCKARSSCLPPLQPLSIARRSLDEWPKAGSDDIGEWPQPPITPGGRGNGNGYGNSSSINNNNGERLKLDLSSIQQNNNHDSRNNGGLVKRDKIAFFDKECSKVAEHVYLGGDAVAKDRGILKRNGITHVLNCVGFVCPEYFKADFVYRTLWLQDSPSEDITSILYDVFDYFEDVREKNGRVFVHCCQGVSRSTSLVIAYLMWREGQSFDDAFQFVKAARGIADPNMGFACQLLQCQKRVHAFPLSPSSLLRMYRIAPHSPYDPLHLVPKMLTDPSSSALDSRGAFIVHIPSAIYVWIGKNCEAIMERDARGAAGQIVRYERVQGSIIMIREGEEPPSFWDAFSKFLPLMDLSGSVVESSKTSVKIFPGERKVDAYNVDFEVFGKAIMGGFVPPFASSENEHETHLPARESSWSVLRRKDSSVNVKEFVSAPKLSLPRVYSDSMLCIHASAISFPSPSASSTTSSLSSSSSPPFVSPDSISSDSSNHSKFLLELSPDSSSLVVAPVPPVSSSLSNFSNLSLSSNSTSLPVSKYTDIYDVKLPSPSSQSASSPLKKSSTSIAERRGSLSKSLKLPLMNDKTQVTDKPSTICAGREHGVLGNNNFSCVQDSDNIDYLFESSNHHHVKDRGMDSTQQSELLSCPDIIESEGCKESSLLRNCVEPCVDSLSRENLKSTAPKGTNESGSLQCTKTQTLVYRWPSLEKIETFGSNHLVSEAAFVIFSPSILMQAGNVLYLWVGSSFKLDASSQDWFDSDRQSDFLGAVDWNRIGCDLLVQFNLPKNTVTKIVKENEEPQEFLALLSSL* 872
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g4202 871 MobiDBLite consensus disorder prediction 97 116 - -
Psa3g4202 871 Pfam Dual specificity phosphatase, catalytic domain 177 307 IPR000340 GO:0008138|GO:0016311
Psa3g4202 871 MobiDBLite consensus disorder prediction 23 58 - -
Psa3g4202 871 MobiDBLite consensus disorder prediction 613 635 - -
Psa3g4202 871 SUPERFAMILY Actin depolymerizing proteins 316 417 - -
Psa3g4202 871 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 228 289 IPR000387 GO:0016311|GO:0016791
Psa3g4202 871 MobiDBLite consensus disorder prediction 613 634 - -
Psa3g4202 871 MobiDBLite consensus disorder prediction 23 79 - -
Psa3g4202 871 ProSiteProfiles Dual specificity protein phosphatase domain profile. 169 311 IPR020422 GO:0006470|GO:0008138
Psa3g4202 871 Gene3D Severin 320 416 IPR029006 -
Psa3g4202 871 PANTHER PROTEIN-TYROSINE-PHOSPHATASE MKP1 1 865 - -
Psa3g4202 871 SMART dsp_5 169 308 IPR020422 GO:0006470|GO:0008138
Psa3g4202 871 ProSitePatterns Tyrosine specific protein phosphatases active site. 253 263 IPR016130 GO:0016311|GO:0016791
Psa3g4202 871 PANTHER MKPA PROTEIN 1 865 - -
Psa3g4202 871 CDD DSP 170 304 - -
Psa3g4202 871 Gene3D Protein tyrosine phosphatase superfamily 141 311 IPR029021 -
Psa3g4202 871 SMART VILL_6 318 415 IPR007122 GO:0051015
Psa3g4202 871 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 164 310 IPR029021 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g4202 Psa-Chr3 394878983 394883393 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g4202 1 205 Protein tyrosine phosphatase (PTP) family AT3G55270 56.938 6.72e-62 222
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g4202 - - mtr:MTR_7g023250 1309.66