Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g4183 ATGAACAAAGGCTTCTGGATGCCTCGTGATACTGGCTGCATAGCTGAAGAAAATGTTGGATATGAAAATTCCTCAAGAGTGGAACCAAAGAGAAGTCACCAGTGGTTTACAGATACAGGTGAACCAGAAATATTTAGCAACAAGAAACAAGCAGTTGAAGCTAGTAGCGACATGCCGGTTTCAACAACGGATGTTTCTCACTGGGACACTGGTTCAGGGTTTCACTCGGTGACAGGCCAATTTTCTGACCGTCTCTTTGGATCTGATCTTATACAGTCTGTCAATTCAGTTGATAAAAATATGTCGTCAACTGGAGGTGGAAATCTGAACATTGGAGGGAGGAAGATTTTTGGTAATCAGTATGGTAATGATACGCCTGTCGGACTGTCAGTATTTCCCACCATAGTAGGCCCTTCACCATGTCTAAATTTTGGTGGTATTAGGAAAGTTAAAGTTAATCAAGTCAGAGATTCTGATCATGGCATGCCAGCTGATAACAATACATTTTCCATAGATTCTGGTTACGATAAGAATGACGGAAATATTACATTGGGCCCATCTTATAGCAACGGAAGTGACAACACCGTTGCTTTAGGGATAAGCAAACCCGGTGACAATCTCCTTGCCATTGGTCACATCTTGGATAAAGGGGATGGGAGTTTTATGTTGATGGGTCAAAATTATGGAAAGGGAGATGAAAGTATTTTATCAACGGGTCGGCCCCTTGAAAGAGGCGACGGAAATTTCATAACAATGAATCAGTCATTTGGGAAGGAAGATGGAAATTTGATATCTTTGGGCACCTCATTTTCCAAGGAGCATGAGAGTTTTACATCAATGGGTGTAACCTCTGATAAATCAGGAGAAAATTTCACAACCGTTGCTCCTTCCTATGACAATGGCACCTCAATAGGTCCGACATATGTTAATGTGGATACAAACATTGCTTCGACTAGTCCATCATTTGACAGCAACAACTCTAGCTTTTTACCTGCAAGTCAAAACCTCGGTAACAGCAGTGCCGTATCTTTTGGAGGTTTTCATGCTGGATGCCCTGAGCCAAATCCCTCGTGCGGAGTCATTAGTGGATTTGATCCTTTGATGGGCAACCAAAACTCAGCTCAAGGTGCGGATAGCCAGAGGGATCTGATTGAATCAAACCCTGTTGTAAATAACACTTCAAAATCTACTGCTAAAAATGATACCGTTGTTAAGAACAAAGAACCAAAGAAGGCCAAGAAGGCTTCTAACAACTTCCCTTCAAATGTCAAAAGTTTGCTGTCAACTGGTATTTTCGACGGCATTTCGGTGAAATATTGTACATGGTCAAGGGAGAGAAATCTTCAAGGAATCATAAAAGGAACGGGGTACATGTGTTCATGTGACGACTGTAAGGGGCAAAAGGCTCTTAATGCGTATGAATTTGAGCGTCACGCTGGAGCCAAGTCAAAACACCCTAACAATCACATATACTTTGAGAATGGAAAATCTATCTATGCTGTTGTTCAAGAGCTGAAAAACAGTCCTCAAGAGACGCTTTTTGACGCTATTCAAACCGTGACCGGTTCCACCATCAACCAAAAGAACTTTCGTAGTTGGAAAGCATCATACCAAGCTGCGACTCGTGAGCTTCAGCGCATCTATGGAAAGGATGATGCGGTCATACCGTCTTAA 1674 0.4217 MNKGFWMPRDTGCIAEENVGYENSSRVEPKRSHQWFTDTGEPEIFSNKKQAVEASSDMPVSTTDVSHWDTGSGFHSVTGQFSDRLFGSDLIQSVNSVDKNMSSTGGGNLNIGGRKIFGNQYGNDTPVGLSVFPTIVGPSPCLNFGGIRKVKVNQVRDSDHGMPADNNTFSIDSGYDKNDGNITLGPSYSNGSDNTVALGISKPGDNLLAIGHILDKGDGSFMLMGQNYGKGDESILSTGRPLERGDGNFITMNQSFGKEDGNLISLGTSFSKEHESFTSMGVTSDKSGENFTTVAPSYDNGTSIGPTYVNVDTNIASTSPSFDSNNSSFLPASQNLGNSSAVSFGGFHAGCPEPNPSCGVISGFDPLMGNQNSAQGADSQRDLIESNPVVNNTSKSTAKNDTVVKNKEPKKAKKASNNFPSNVKSLLSTGIFDGISVKYCTWSRERNLQGIIKGTGYMCSCDDCKGQKALNAYEFERHAGAKSKHPNNHIYFENGKSIYAVVQELKNSPQETLFDAIQTVTGSTINQKNFRSWKASYQAATRELQRIYGKDDAVIPS* 558
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g4183 557 Pfam Tify domain binding domain 450 505 IPR032308 -
Psa3g4183 557 PANTHER N-LYSINE METHYLTRANSFERASE 2 557 - -
Psa3g4183 557 PANTHER AUTOIMMUNE REGULATOR 2 557 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g4183 Psa-Chr3 393551535 393555568 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g4183 416 538 PHD Transcription Factor Family AT3G53680 55.285 3.98e-39 151
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g4183 - - gmx:100782217 771.541