Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g4148 ATGGCCGGAAAAGGAGAAGGTCCAGCGATCGGAATCGATCTCGGTACAACATACTCTTGCGTCGGCGTCTGGCAGCACGACCGAGTCGAGATCATTGCCAATGATCAAGGAAACCGTACCACGCCGTCTTATGTCGCTTTTACCGACAGTGAAAGGTTGATCGGTGATGCCGCTAAGAATCAGGTCGCCATGAACCCTATCAACACCGTTTTCGATGCAAAACGTTTGATTGGAAGGAGAGTCTCTGATGCTTCTGTTCAGAGTGATTTGAAGCATTGGCCGTTCAAGGTTATTGCTGGTCCAGGTGAAAAGCCTATGATTGTGGTAAACTATAAGGGTGAGGACAAGCAATTTTCTGCTGAGGAAATTTCCTCTATGGTCCTCATTAAGATGCGTGAGATTGCTGAGGCTTATCTCGGTTCTACTGTGAAGAATGCTGTTGTTACAGTTCCTGCTTACTTCAATGACTCTCAGCGTCAAGCTACAAAGGATGCGGGTGCCATTGCTGGTTTGAATGTGTTGAGAATAATCAATGAGCCAACTGCAGCAGCTATTGCTTATGGTCTTGACAAGAAGGCTACAAGTGTTGGTGAGAAGAATGTCTTGATCTTTGATTTGGGTGGTGGTACTTTTGATGTATCACTTCTCACTATTGAAGAGGGGATTTTTGAAGTTAAAGCCACTGCTGGGGATACCCATCTTGGTGGAGAAGATTTTGATAACAGAATGTGTTTAAGGGATGCTAAGATGGACAAGAGCACTGTTCATGATGTTGTTCTTGTTGGGGGTTCCACTAGGATTCCTAAAGTTCAGCAGCTTTTACAAGACTTCTTCAATGGTAAGGAGCTTTGTAAGAGTATCAACCCTGACGAGGCTGTGGCTTATGGAGCTGCTGTCCAAGCAGCTATATTGAGTGGTGAAGGTAATGAGAAGGTTCAAGACTTGTTGCTTTTGGATGTCACCCCATTGTCTCTTGGTTTGGAAACTGCTGGTGGTGTCATGACTGTGTTGATTCAAAGGAACACCACAATTCCAACCAAGAAGGAGCAGGTTTTCTCTACTTACTCAGACAACCAACCCGGTGTCTTGATCCAAGTATATGAAGGTGAGAGAGCAAGAACAAAAGACAACAACTTGTTGGGCAAATTTGAGCTTTCCGGCATCCCTCCTGCTCCCCGTGGTGTTCCTCAGATCACAGTCTGTTTTGACATTGATGCTAATGGTATCTTGAATGTCTCTGCTGAGGACAAAACAACCGGGCAGAAGAACAAGATCACAATTACTAATGACAAAGGTAGACTGTCAAAGGAGGAGATTGAGAAGATGGTTGAGGAAGCAGAGAAATACAAGGCAGAAGATGAGGAACACAAGAAGAAGGTTGATGCAAAGAATGCACTGGAAAACTATGCTTACAACATGAGGAACACGATTAAGGATGAAAAGATTGCTTCAAAGCTTTCGGCTGATGACAAGAAAAAGATTGAAGATGCAATTGATGCTTCAATTACTTGGTTGGATAATAACCAATTGGCTGAAGCAGATGAGTTTGAAGATAAGATGAAGGAACTTGAGAGTCTTTGCAACCCAATAATTGCTAAGATGTACCAAGGTGGAGCTGCTCCTGACATGGGTGGTGATGATGATGAAGTTCCTCCAGCTGCAGGTGGTGCTGGTCCCAAGATTGAAGAGGTTGATTAA 1698 0.4411 MAGKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDSERLIGDAAKNQVAMNPINTVFDAKRLIGRRVSDASVQSDLKHWPFKVIAGPGEKPMIVVNYKGEDKQFSAEEISSMVLIKMREIAEAYLGSTVKNAVVTVPAYFNDSQRQATKDAGAIAGLNVLRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAAVQAAILSGEGNEKVQDLLLLDVTPLSLGLETAGGVMTVLIQRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVEEAEKYKAEDEEHKKKVDAKNALENYAYNMRNTIKDEKIASKLSADDKKKIEDAIDASITWLDNNQLAEADEFEDKMKELESLCNPIIAKMYQGGAAPDMGGDDDEVPPAAGGAGPKIEEVD* 566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g4148 565 ProSitePatterns Heat shock hsp70 proteins family signature 3. 258 272 IPR018181 -
Psa3g4148 565 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 310 467 IPR029047 -
Psa3g4148 565 Gene3D - 71 126 - -
Psa3g4148 565 ProSitePatterns Heat shock hsp70 proteins family signature 2. 203 216 IPR018181 -
Psa3g4148 565 Gene3D - 192 234 - -
Psa3g4148 565 Gene3D - 244 284 - -
Psa3g4148 565 ProSitePatterns Heat shock hsp70 proteins family signature 1. 12 19 IPR018181 -
Psa3g4148 565 Gene3D - 464 537 IPR029048 -
Psa3g4148 565 SUPERFAMILY Actin-like ATPase domain 198 306 IPR043129 -
Psa3g4148 565 SUPERFAMILY Actin-like ATPase domain 8 191 IPR043129 -
Psa3g4148 565 Pfam Hsp70 protein 244 536 IPR013126 GO:0005524|GO:0140662
Psa3g4148 565 Pfam Hsp70 protein 9 243 IPR013126 GO:0005524|GO:0140662
Psa3g4148 565 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 309 463 IPR029047 -
Psa3g4148 565 PANTHER HEAT SHOCK COGNATE 70 KDA PROTEIN 2-LIKE 1 243 - -
Psa3g4148 565 PANTHER HEAT SHOCK COGNATE 70 KDA PROTEIN 2-LIKE 244 546 - -
Psa3g4148 565 MobiDBLite consensus disorder prediction 538 565 - -
Psa3g4148 565 Gene3D - 10 191 - -
Psa3g4148 565 Gene3D - 285 302 - -
Psa3g4148 565 Coils Coil 432 459 - -
Psa3g4148 565 PRINTS 70kDa heat shock protein signature 8 21 - -
Psa3g4148 565 PRINTS 70kDa heat shock protein signature 36 48 - -
Psa3g4148 565 PRINTS 70kDa heat shock protein signature 58 66 - -
Psa3g4148 565 PRINTS 70kDa heat shock protein signature 146 166 - -
Psa3g4148 565 PRINTS 70kDa heat shock protein signature 209 219 - -
Psa3g4148 565 Coils Coil 506 526 - -
Psa3g4148 565 PANTHER HEAT SHOCK PROTEIN 70KDA 244 546 IPR013126 GO:0005524|GO:0140662
Psa3g4148 565 PANTHER HEAT SHOCK PROTEIN 70KDA 1 243 IPR013126 GO:0005524|GO:0140662
Psa3g4148 565 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 461 542 IPR029048 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g4148 Psa-Chr3 389537958 389540583 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g4148 244 565 Calmodulin-binding Proteins AT3G12580 92.945 0.0 594