Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g4131 ATGAGATATTTCTATTTCTATCTCTATATTTTTGTTCTTTCTTTGTTTTTCTCCATCCATTCTACTCATCAGCTACAATTCTCTCAAACTCAAGTCCTGTTACAGTTAAGAAAGTATCTTCAATACCCTACCTCCTTACAAGTTTTTCAAAGTTACAATGATGACCTTTGTACCCTTACTCCATCTCAACATTTGAGTATTAAATGTGAGGGAAATTCAGTAACTGAACTCAAAATCATGGGAGACTACAACAATAAACATGGAAAGGTTTCCAATTTCAATGGCTTTGCAGTTCCAAATCAAACACTTTCCAAAACTTTCTCTATTGATTCTTTTGTCACAACACTGACAAGGTTAACAAGTTTAAGAGTACTTAGTTTAGTTTCTTTAGGAATTTGGGGTCCACTTCCTGATAAGATTCATAGGCTTAGTTTGCTTCAAGTTTTGGATTTGAGTTCTAATTTCTTATTTGGTTCCATTCCACCAAAGATAGCTACATTGATGAATCTTCAAATACTAACACTTGATAGAAACTACTTCAACACCACAATGCCTGATTTTTTTGAACCTTTGTGTAATTTAAGTATCTTGAGTTTCAAAAAGAATCAGTTAAAAGGCTCATTCCCTTTTTCACTATGCAAAATCAAGAATCTTACTGATATTTCCTTGGCACACAATGAACTATCTGGTGCATTGCCGAATCTCACCGCGCTTTCGAGGCTACATGTATTGGATTTGATGGAAAATAGTTTTCATTCTCGGTTACCGCTGATGCCGAAATCGGTTGTCACGGTGTTGCTAAGTAAGAACTCATTTGCAGGTGAGATTCCTAGTCAGTTTGGTGAACTGAGTCAGCTTCAGAATCTCGATCTTTCCTCGAATCGTCTCAGCGGGGCTCCTCCGTCTTTGTTGTTTTCTTTGACTAACATTAGTTATTTGAATTTAGCAAACAATGTGCTAAGTGGTTCAATTCCGGAGAAACTAAATTGTGGAAGCAAGCTTGGTTTTGTGGATATTTCTAGCAACATGTTAAGTGGTTTACTTCCTTCTTGCTTGGAAAGTATATCTGATAGAAGAGTTGTTAGATTTGGTGGAAACTGTTTGTCTGTTAATTCTCAACCTCAGAATCAGAATCAGAAACATGGTTCTTATTGTGAGGAATCTAATTCAGGAAAGATGAAATTTTGGAGATGGGAAATTGATGCTGCAATTGCTATCATTGTTCTAGTTTTTCTTTTCTTGTTAGCTTTTGGAGTTTTCCTTTACAGGAAGTGTCATTCAACAGAGATTTATAGGCATGAGATGTTGCCAAAGATTGTTCAAGATAATAATTCAACAACAGGAGTTTCCTTTGAACTCCTTGTCAGTGCAAGATATATTTCTCAAAAAATGAATCTAGGGGCACAAACTACTACAACATGTAGACACTTTTCAATTGAAGAGTTGAAAGAAATCACAAGAAACTTTGATTTGTCAGCTTATATTGGTGAAGGATCCATAGGAAAGCTGTACAAAGGTAAACTGGAGAATGGATCTTATGTGATGATAAGATCATTGGCTCTGAGAAAGAAGTTGTCAATACAAAATCTCAAAGCTAGATTGGATTTACTCTCAAAGCTTCATCATCCGAATTTGGTTTGTCTTTTGGGTCATTGCATCGATGGTAGAGGAAAAGATGGTATTAGTCCCCAGAAACTTCACCTTGTATACGAGTATGTGCAAAATGGCGATTATCGTACACATTTGTTAGAATTTTCACCGAATAAGGCACTAAAATGGTCTGAGAGATTAGCAATCTTAATCGGAGTTGCCAAGGCGGTTCATTTTTTACATACTGGTATGAAACCAGGTTGTTTTAGAAACCAATTAAAGACAAACAATATTTTACTCGATGAACATCGCTTTCCCAAGCTAAGTGACTATGGTATGTCCATAATCACCGAAGAGATTGAAAACAATGAGGTAAAAGGAGAGAAACCAAAATTAGAGGATGATGTTTACAATTTTGGGTTTATATTGTTTGAATCACTTGCTGGACCAATTGCAAGTGAGAAAGGAGAAGCTTTTTTTCTTAATGAAAGGGCATCGTTTGACAGTCATGATGGTAGAAAAAGAATTGTAGATCCAGTAGTGTTGACAAGTTGCTGTCAAGAGTCTTTATCAATTGTAATATCCATCACAATCAAATGCATTTCTACACAATCCTTGTCTCGTCCTTCTTTTGAAGATGTTCTGTGGAATTTGCAATATGCAGCTCAAGTTCAAGCCTCAGCAGATGCAGAACATTCTATATCATAG 2298 0.359 MRYFYFYLYIFVLSLFFSIHSTHQLQFSQTQVLLQLRKYLQYPTSLQVFQSYNDDLCTLTPSQHLSIKCEGNSVTELKIMGDYNNKHGKVSNFNGFAVPNQTLSKTFSIDSFVTTLTRLTSLRVLSLVSLGIWGPLPDKIHRLSLLQVLDLSSNFLFGSIPPKIATLMNLQILTLDRNYFNTTMPDFFEPLCNLSILSFKKNQLKGSFPFSLCKIKNLTDISLAHNELSGALPNLTALSRLHVLDLMENSFHSRLPLMPKSVVTVLLSKNSFAGEIPSQFGELSQLQNLDLSSNRLSGAPPSLLFSLTNISYLNLANNVLSGSIPEKLNCGSKLGFVDISSNMLSGLLPSCLESISDRRVVRFGGNCLSVNSQPQNQNQKHGSYCEESNSGKMKFWRWEIDAAIAIIVLVFLFLLAFGVFLYRKCHSTEIYRHEMLPKIVQDNNSTTGVSFELLVSARYISQKMNLGAQTTTTCRHFSIEELKEITRNFDLSAYIGEGSIGKLYKGKLENGSYVMIRSLALRKKLSIQNLKARLDLLSKLHHPNLVCLLGHCIDGRGKDGISPQKLHLVYEYVQNGDYRTHLLEFSPNKALKWSERLAILIGVAKAVHFLHTGMKPGCFRNQLKTNNILLDEHRFPKLSDYGMSIITEEIENNEVKGEKPKLEDDVYNFGFILFESLAGPIASEKGEAFFLNERASFDSHDGRKRIVDPVVLTSCCQESLSIVISITIKCISTQSLSRPSFEDVLWNLQYAAQVQASADAEHSIS* 766
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g4131 765 ProSiteProfiles Protein kinase domain profile. 489 751 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa3g4131 765 PANTHER OS07G0166700 PROTEIN 6 762 IPR045272 GO:0004714|GO:0006468
Psa3g4131 765 SUPERFAMILY Protein kinase-like (PK-like) 469 748 IPR011009 -
Psa3g4131 765 Gene3D Ribonuclease Inhibitor 261 393 IPR032675 -
Psa3g4131 765 PANTHER LEUCINE-RICH REPEAT PROTEIN KINASE FAMILY PROTEIN 6 762 - -
Psa3g4131 765 SUPERFAMILY L domain-like 116 369 - -
Psa3g4131 765 Gene3D Ribonuclease Inhibitor 27 260 IPR032675 -
Psa3g4131 765 Gene3D Phosphorylase Kinase; domain 1 460 572 - -
Psa3g4131 765 Gene3D Transferase(Phosphotransferase) domain 1 573 764 - -
Psa3g4131 765 Pfam Protein tyrosine and serine/threonine kinase 491 657 IPR001245 GO:0004672|GO:0006468
Psa3g4131 765 SMART LRR_typ_2 283 306 IPR003591 -
Psa3g4131 765 SMART LRR_typ_2 143 167 IPR003591 -
Psa3g4131 765 SMART LRR_typ_2 307 331 IPR003591 -
Psa3g4131 765 Pfam Leucine rich repeat 263 320 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g4131 Psa-Chr3 388423379 388427287 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g4131 8 693 Miscellaneous Gene Families AT5G14210 55.064 0.0 706
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-1 Psa3g4131 PK_Tyr_Ser-Thr 2.4e-18 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g4131 - - gmx:100813412 1060.44