Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g4124 ATGGCCGGAAAAGGAGAAGGTCCAGCGATCGGAATCGATCTCGGTACAACATACTCTTGCGTCGGCGTGTGGCAGCACGACCGAGTCGAGATCATTGCCAATGATCAAGGAAACCGTACCACGCCGTCTTATGTTGCTTTTACTGACAGTGAAAGATTGATCGGTGATGCCGCTAAGAATCAGGTCGCCATGAACCCTATTAACACCGTCTTCGATGCAAAACGTTTGATTGGAAGGAGAGTTTCTGATGCATCTGTTCAGAGTGATTTGAAGCATTGGCCATTCAAGGTTATCGCTGGTCCCGGTGAAAAGCCTATGATTGTGGTAAACTATAAGGGTGAGGACAAACAATTTTCTGCCGAGGAAATTTCCTCTATGGTGCTTATTAAGATGCGTGAGATTGCTGAGGCTTATCTTGGTTCTACTGTGAAGAACGCTGTTGTTACCGTTCCTGCTTACTTCAATGACTCCCAGCGTCAAGCTACAAAGGATGCTGGTGCTATTGCTGGCTTGAATGTCCTGAGAATAATCAATGAGCCAACTGCAGCTGCTATTGCATACGGGCTTGACAAGAAAGCTACAAGTGTTGGTGAGAAGAATGTGTTGATCTTTGATTTGGGAGGTGGTACTTTTGATGTGTCTCTTCTTACTATTGAAGAGGGTATTTTTGAAGTTAAAGCCACTGCTGGTGATACCCATCTTGGTGGTGAAGATTTTGATAACAGGATGAAGTGTCTTAGGGATGCAAAGATGGACAAGAGCACAGTTCATGATGTTGTTCTTGTTGGTGGTTCCACTAGGATTCCTAAAGTTCAGCAGTTGTTGCAGGACTTCTTCAATGGTAAGGAGCTATGCAAGAGTATCAACCCTGACGAGGCTGTTGCTTATGGAGCTGCTGTCCAAGCTGCCATCTTGAGTGGTGAAGGTAATGAGAAGGTACAAGATTTGTTGCTTTTGGACGTCACTCCATTGTCTCTAGGTCTAGAAACTGCTGGTGGTGTCATGACTGTTCTTATTCAAAGGAATACTACAATTCCAACCAAGAAGGAACAAGTATTCTCTACTTACTCAGATAACCAACCTGGTGTCTTGATCCAAGTTTTTGAGGGTGAAAGAGCAAGAACCAAAGACAACAACTTGTTGGGTAAATTTGAGCTTTCTGGAATTCCTCCAGCACCCCGTGGTGTACCTCAAATCACTGTTTGCTTTGACATTGATGCCAATGGTATCTTGAATGTCTCGGCTGAGGACAAAACAACTGGGCAAAAGAACAAGATCACAATTACTAACGACAAAGGTAGACTCTCGAAGGAGGAGATTGAGAAGATGGTTGAGGAAGCAGAGAAATACAAGGCAGAAGATGAGGAGCACAAGAAGAAGGTTGATGCAAAGAATGCTTTGGAAAACTATGCTTACAACATGAGGAACACAATCAATGATGAAAAAATTGGATCAAAGCTCTCCCCTGAAGACAAGAAGAAGATAGATGATGCAATTGAGGCTGCAATTCAGTGGTTGGATAGTAACCAATTGGCTGAAGCAGATGAGTTTGAAGATAAGATGAAGGAGCTTGAAAGTCTTTGCAATCCAATCATTGCTAAGATGTATCAAGGTGGAGGAGCTCCGGACATGGGTGGTGATGATGATGAAGTTCCTCCAGCTGCAGGTGGTGCTGGTCCCAAAATTGAGGAAGTTGACTAA 1701 0.4386 MAGKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDSERLIGDAAKNQVAMNPINTVFDAKRLIGRRVSDASVQSDLKHWPFKVIAGPGEKPMIVVNYKGEDKQFSAEEISSMVLIKMREIAEAYLGSTVKNAVVTVPAYFNDSQRQATKDAGAIAGLNVLRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAAVQAAILSGEGNEKVQDLLLLDVTPLSLGLETAGGVMTVLIQRNTTIPTKKEQVFSTYSDNQPGVLIQVFEGERARTKDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVEEAEKYKAEDEEHKKKVDAKNALENYAYNMRNTINDEKIGSKLSPEDKKKIDDAIEAAIQWLDSNQLAEADEFEDKMKELESLCNPIIAKMYQGGGAPDMGGDDDEVPPAAGGAGPKIEEVD* 567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g4124 566 Gene3D - 71 126 - -
Psa3g4124 566 Pfam Hsp70 protein 9 243 IPR013126 GO:0005524|GO:0140662
Psa3g4124 566 Pfam Hsp70 protein 244 537 IPR013126 GO:0005524|GO:0140662
Psa3g4124 566 SUPERFAMILY Actin-like ATPase domain 198 307 IPR043129 -
Psa3g4124 566 PANTHER HEAT SHOCK PROTEIN 70KDA 1 243 IPR013126 GO:0005524|GO:0140662
Psa3g4124 566 PANTHER HEAT SHOCK PROTEIN 70KDA 244 547 IPR013126 GO:0005524|GO:0140662
Psa3g4124 566 ProSitePatterns Heat shock hsp70 proteins family signature 2. 203 216 IPR018181 -
Psa3g4124 566 MobiDBLite consensus disorder prediction 539 566 - -
Psa3g4124 566 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 310 464 IPR029047 -
Psa3g4124 566 ProSitePatterns Heat shock hsp70 proteins family signature 1. 12 19 IPR018181 -
Psa3g4124 566 Gene3D - 10 191 - -
Psa3g4124 566 Gene3D - 286 303 - -
Psa3g4124 566 Coils Coil 433 460 - -
Psa3g4124 566 ProSitePatterns Heat shock hsp70 proteins family signature 3. 259 273 IPR018181 -
Psa3g4124 566 Gene3D - 465 538 IPR029048 -
Psa3g4124 566 SUPERFAMILY Actin-like ATPase domain 8 191 IPR043129 -
Psa3g4124 566 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 311 468 IPR029047 -
Psa3g4124 566 PRINTS 70kDa heat shock protein signature 8 21 - -
Psa3g4124 566 PRINTS 70kDa heat shock protein signature 36 48 - -
Psa3g4124 566 PRINTS 70kDa heat shock protein signature 58 66 - -
Psa3g4124 566 PRINTS 70kDa heat shock protein signature 146 166 - -
Psa3g4124 566 PRINTS 70kDa heat shock protein signature 209 219 - -
Psa3g4124 566 PANTHER HEAT SHOCK COGNATE 70 KDA PROTEIN 2-LIKE 244 547 - -
Psa3g4124 566 PANTHER HEAT SHOCK COGNATE 70 KDA PROTEIN 2-LIKE 1 243 - -
Psa3g4124 566 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 462 543 IPR029048 -
Psa3g4124 566 Gene3D - 244 285 - -
Psa3g4124 566 Gene3D - 192 234 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g4124 Psa-Chr3 387774841 387777570 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g4124 244 566 Calmodulin-binding Proteins AT5G02490 89.666 0.0 593
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g4124 K03283 K09490 pcad:102982689 783.482