Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g4111 ATGGAGAATTTTGATATGCATTGTTGTAATGAGAAATTTAGAATGACTGATGAACAAGTCGAAACTCTTCGAAAACAAATCGCAGTATACACATACATCTCTGAACAACTCATTCAAAGGCATACACACTCCTCTTCTCGCCAACATCTCACTAATGGGGCTAGAATGAGAATGTTTTGTGACTCAAGATTAATCGACAAATTAAGTTCGAAGCAACGTTGGAAACCGACAATTTCCCAGGTTCAAGCTTTGGAGAAAATATATGCGGCTAATCCAGAGGCTCCAAACAAGGAAACGATTAAAAAGATAACTGTTGATTTAAGCGAGCATGGGAAGATTTCAGAGAGCAATGTATATAATTGGTTTCAGAATAGACGTGCCAGGTCAAAGAAAAAGAAGCATAGTAATGTTGATGCAAAATCAAAAGTTGATTCCAAAGATAAGATACCTAAACTCAATGAGTCTGATGAAAATCTGGGCCACCAAAACTCTCCAGAAAATTCTGACTTTTTACCGTACTTTAATCTAGAATTAGATGAGAGTTTTGCAATCCTCTAA 558 0.3638 MENFDMHCCNEKFRMTDEQVETLRKQIAVYTYISEQLIQRHTHSSSRQHLTNGARMRMFCDSRLIDKLSSKQRWKPTISQVQALEKIYAANPEAPNKETIKKITVDLSEHGKISESNVYNWFQNRRARSKKKKHSNVDAKSKVDSKDKIPKLNESDENLGHQNSPENSDFLPYFNLELDESFAIL* 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g4111 185 SUPERFAMILY Homeodomain-like 69 133 IPR009057 -
Psa3g4111 185 MobiDBLite consensus disorder prediction 127 166 - -
Psa3g4111 185 ProSiteProfiles 'Homeobox' domain profile. 67 132 IPR001356 GO:0003677
Psa3g4111 185 MobiDBLite consensus disorder prediction 137 155 - -
Psa3g4111 185 Gene3D - 73 138 - -
Psa3g4111 185 CDD homeodomain 71 133 IPR001356 GO:0003677
Psa3g4111 185 PANTHER WUSCHEL-RELATED HOMEOBOX 13 14 176 IPR044559 GO:0003700
Psa3g4111 185 Pfam Homeodomain 71 131 IPR001356 GO:0003677
Psa3g4111 185 SMART HOX_1 69 136 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g4111 Psa-Chr3 384161697 384162356 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g4111 15 134 Wox Gene Family AT4G35550 51.220 4.84e-39 132
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Psa3g4111 Homeodomain 5.3e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g4111 - - gmx:100784355 145.591