Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g4100 ATGCAGATCTTCGTCAAGACTTTAACCGGAAAAACCATCACTCTCGAGGTTGAGAGCAGCGACACCATCGACAACGTCAAGGCCAAGATCCAGGTTGGAACCAAAATGCCGGATGTTCATATCCTTGTTAATGATTTTGTGAATCAGCTTAAAAAACGTAAAATTGAAGGTTCTCAGGCCTCGGCAAAGCAGACAGCAGAGTTGCTTCGGTCTGTGATTTCACAACAGAGGTTGCCTCAGACAAATCAGGCCACAGCTCTGATTAATGCAGTAAGGGCTGTCGGGGAGAAGCTTATCGCTGCTAATCCTGTTGGTATGCTGAGATGGCGATTTTACTTATTTTTAAACTACAAATATGTGTCAGAACGAGCTGTACATGTGTTAATTAGTGGTATATTTTATAGTTAA 408 0.424 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQVGTKMPDVHILVNDFVNQLKKRKIEGSQASAKQTAELLRSVISQQRLPQTNQATALINAVRAVGEKLIAANPVGMLRWRFYLFLNYKYVSERAVHVLISGIFYS* 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g4100 135 PANTHER TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT BETA 36 106 - -
Psa3g4100 135 ProSiteProfiles Ubiquitin domain profile. 1 31 IPR000626 GO:0005515
Psa3g4100 135 SUPERFAMILY Ubiquitin-like 1 37 IPR029071 -
Psa3g4100 135 Gene3D - 1 84 - -
Psa3g4100 135 Pfam Ubiquitin family 3 37 IPR000626 GO:0005515
Psa3g4100 135 PANTHER TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT BETA-LIKE 36 106 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g4100 Psa-Chr3 383357636 383358964 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g4100 36 104 Eukaryotic Initiation Factors Gene Family AT3G07300 73.913 4.21e-28 104
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g4100 K03754 - gmx:100801044 119.012