Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g4070 ATGTCGAAAAAGTATGAAGGTCTTGCCGTAGGGATAGACTGTGGAACAACGTATTCATGTGTTGTTGTGTGGCTTGATGAACACAATAGAGTTGAAATTATTCACAATTATCAAGGCAATAGAACTACACGTTCTTTTATTTCTTTCAAATATGATCAAAGGTTGATTGGTGATGTTGTTAAAAATCAGGCTGCTTTAAACCCTACGAGCACTATCTTTGATGCTAAGAGATTGATTGGTAGAAAGTTTAGTGATTCTGTTGTTCAAAATGATATGAGGATGTGGCCATTCAAGGTGATTGCTGATGACAATGATAAACATGTGATTATTATTCAATACAAGGGTCAAGAGAAGCACTTTTCTGCGGAGGAAATATCGGCTATGATTCTTAAAAAGATGCTAGAGGTTTCGGAAAATTTTCTATCCTCCGAGGTAAGAAAAAGAAATGCGGTTGTTACTGTGCCAGATTACTTTAATGATTCTCAGCGGAAAGCCACCATAGAAGCTGGTGCTATTGCTGGCCTTAATGTCATTAAGATAATCAATGAACCTATTACTGCAGTTATTGCATATGGTCTTGACAAGAAAAGTGATTGTGATGGAAAGCGAAATATTTTTGTCTTTGATCTTGGTGGTGGAACTTTTGATGTTGCTATTCTCACAATTAAAGTGGTTGAGGTTTACGAGGGTGAGAGAGCAAGAACTCTGATAATAATCATCTTGGTTCCTTTATTTTCTCTTGCATTCCAGGTCCCTGTGGCCAGTCAACTTTTCTATAGATGA 783 0.3704 MSKKYEGLAVGIDCGTTYSCVVVWLDEHNRVEIIHNYQGNRTTRSFISFKYDQRLIGDVVKNQAALNPTSTIFDAKRLIGRKFSDSVVQNDMRMWPFKVIADDNDKHVIIIQYKGQEKHFSAEEISAMILKKMLEVSENFLSSEVRKRNAVVTVPDYFNDSQRKATIEAGAIAGLNVIKIINEPITAVIAYGLDKKSDCDGKRNIFVFDLGGGTFDVAILTIKVVEVYEGERARTLIIIILVPLFSLAFQVPVASQLFYR* 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g4070 260 Pfam Hsp70 protein 9 223 IPR013126 GO:0005524|GO:0140662
Psa3g4070 260 Gene3D - 204 236 - -
Psa3g4070 260 Gene3D - 73 124 - -
Psa3g4070 260 SUPERFAMILY Actin-like ATPase domain 9 195 IPR043129 -
Psa3g4070 260 PRINTS 70kDa heat shock protein signature 8 21 - -
Psa3g4070 260 PRINTS 70kDa heat shock protein signature 38 50 - -
Psa3g4070 260 PRINTS 70kDa heat shock protein signature 60 68 - -
Psa3g4070 260 PRINTS 70kDa heat shock protein signature 150 170 - -
Psa3g4070 260 PRINTS 70kDa heat shock protein signature 213 223 - -
Psa3g4070 260 PANTHER HEAT SHOCK 70 KDA PROTEIN 4 224 - -
Psa3g4070 260 PANTHER HEAT SHOCK PROTEIN 70KDA 4 224 IPR013126 GO:0005524|GO:0140662
Psa3g4070 260 Gene3D - 5 203 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g4070 Psa-Chr3 380291380 380292284 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g4070 1 223 Calmodulin-binding Proteins AT5G02500 63.677 1.81e-99 298
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g4070 K03283 - gmx:102667578 313.538