Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g4068 ATGGCAAAAAAGTATGAAGGATGTGCGGTGGGAATAGATCTTGGAACAACATATTCTTGTGTTGCTGTGTGGCTTGATGAACACAATAGAGCGGAGATAATACACAATGAACAAGGAAATAGAACTACACCTTCATTTGTTGCTTTCACTGATGATCAAAGGTTGATTGGTGATGCTGCTAAGAATCAGGTTGCCACCAACGCAGAAAACACCGTCTTTGATGCTAAGAGATTGATTGGCAGGAAGTATAGTGATTCTGTTGTTCAAAAAGATAGGATGTTGTGGCCATTCAAGGTCATTTCAGGTGTCAATGACAAACCTATGATTGTTGTTAAGTATAAAGGTCAGGAGAAACTTCTATGTGCCGAGGAAATTTCATCTATGATCCTCACAAAAATGCGGGAGATTGCAGAGAAATTTCTGGAGTCTCCAATAAAGAATGTAGTTGTTACAGTGCCGGCTTATTTTTGTGATGCTCAGCGAAAAGCTACAGTAGATGCTGGTGCCATTGCTGGTCTTAATGTTATACGGATCATCAATGAACCAACTGCTGCTGCTCTTGCATATGGACTTGATAAGAGATCTAACTGTGTTGGAGAAAAAAATATTTTTGTTTTTGACCTTGGTGGTGGCACTTTTGATGTGTCCATCTTAACAATCAAGGATAAGGTCTTCCAAGTTAAAGCCACGGGCGGAAACACTCACCTCGGAGGAGAGGACATTGATAACCGGATGGTGAACTACTTTGTAGACGAGTTTAAGAGGAAGAACAAAGTGGATATTACTGGGAACCCTAGGGCTTTGAGGAGGTTGAGAACTGCTTGTGAAAGGGCAAAAAGGGTACTCTCTTTTTCTGTTGTCACCACGGTTGAGGTAGACTCTTTATTCCAAGGTATTGACTTCTTTTCTTCCATTACTCGTGCCAAGTTTGAGGAAATCAATATGGACATTTTTAACGAGTGTATGGAGATCGTCAAGAGTTGTCTTACAGATGCTAACATGGACAAGAGTACTGTAAATGACGTTGTTCTTGTTGGTGGGTCTTCTAGGATTCCCAAAGTGCAGCAACTATTGCAGGAATATTTCAACGGAAAGGATTTATGCATGAGCATCAACCCTGATGAGGCAGTTGCTTATGGAGCCGCTGTACAGGCTGCTTTGTTGAGTGAAGGCTTTCAAAATGTTCCAAACTTGGTGCTCCGTGATGTTACACCATTGTCTCTTGGTTTGTCAGCAACGGGAGATATCATGAATGTGGTGATTCCTAGGAACACTTGCATTCCCGTCAAGATTACCCAAAGTCGTGAAACAGTTGCAGATAATCAACCTGACGTCTTGATTGAGGTTTATGAGGGTGAAAGAACTAGAGCCAGTGATAACAATCTGCTCGGTTCTTTTACTCTTTCAGAAGCCAAGAACTACGGTATTGAAGATAAGAAATTTCCAAAGAAGGCTAAAGTAATGAATGCTTTAGATTACTGTGTTTACAAGGTGAAGAATGCTTTAAAGCAACCAGAGCCTAATTCAAAGCTTTCGTCTGTAGATATCGACATGATCAATTCTGCAATTACGGTAGCCTCAAACTTGCTTGATAGTAGCCAGCAGGTTGAAATTGGTGTTCTTAAGAGTCATCTGAAGGAGCTTGAGAGTATGCTCGAACGCATTATTACAGACAAGAAGGAATAG 1686 0.4098 MAKKYEGCAVGIDLGTTYSCVAVWLDEHNRAEIIHNEQGNRTTPSFVAFTDDQRLIGDAAKNQVATNAENTVFDAKRLIGRKYSDSVVQKDRMLWPFKVISGVNDKPMIVVKYKGQEKLLCAEEISSMILTKMREIAEKFLESPIKNVVVTVPAYFCDAQRKATVDAGAIAGLNVIRIINEPTAAALAYGLDKRSNCVGEKNIFVFDLGGGTFDVSILTIKDKVFQVKATGGNTHLGGEDIDNRMVNYFVDEFKRKNKVDITGNPRALRRLRTACERAKRVLSFSVVTTVEVDSLFQGIDFFSSITRAKFEEINMDIFNECMEIVKSCLTDANMDKSTVNDVVLVGGSSRIPKVQQLLQEYFNGKDLCMSINPDEAVAYGAAVQAALLSEGFQNVPNLVLRDVTPLSLGLSATGDIMNVVIPRNTCIPVKITQSRETVADNQPDVLIEVYEGERTRASDNNLLGSFTLSEAKNYGIEDKKFPKKAKVMNALDYCVYKVKNALKQPEPNSKLSSVDIDMINSAITVASNLLDSSQQVEIGVLKSHLKELESMLERIITDKKE* 562
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g4068 561 Gene3D - 470 560 IPR029048 -
Psa3g4068 561 SUPERFAMILY Actin-like ATPase domain 8 193 IPR043129 -
Psa3g4068 561 SUPERFAMILY Actin-like ATPase domain 200 389 IPR043129 -
Psa3g4068 561 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 488 558 IPR029048 -
Psa3g4068 561 ProSitePatterns Heat shock hsp70 proteins family signature 1. 12 19 IPR018181 -
Psa3g4068 561 ProSitePatterns Heat shock hsp70 proteins family signature 2. 205 218 IPR018181 -
Psa3g4068 561 PANTHER HEAT SHOCK PROTEIN 70KDA 468 558 IPR013126 GO:0005524|GO:0140662
Psa3g4068 561 PANTHER HEAT SHOCK PROTEIN 70KDA 4 470 IPR013126 GO:0005524|GO:0140662
Psa3g4068 561 Pfam Hsp70 protein 9 471 IPR013126 GO:0005524|GO:0140662
Psa3g4068 561 ProSitePatterns Heat shock hsp70 proteins family signature 3. 342 356 IPR018181 -
Psa3g4068 561 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 389 469 IPR029047 -
Psa3g4068 561 PRINTS 70kDa heat shock protein signature 8 21 - -
Psa3g4068 561 PRINTS 70kDa heat shock protein signature 38 50 - -
Psa3g4068 561 PRINTS 70kDa heat shock protein signature 60 68 - -
Psa3g4068 561 PRINTS 70kDa heat shock protein signature 148 168 - -
Psa3g4068 561 PRINTS 70kDa heat shock protein signature 211 221 - -
Psa3g4068 561 PRINTS 70kDa heat shock protein signature 339 355 - -
Psa3g4068 561 PRINTS 70kDa heat shock protein signature 371 391 - -
Psa3g4068 561 PRINTS 70kDa heat shock protein signature 397 416 - -
Psa3g4068 561 Gene3D - 194 368 - -
Psa3g4068 561 Gene3D - 10 386 - -
Psa3g4068 561 PANTHER HEAT SHOCK 70 KDA PROTEIN 468 558 - -
Psa3g4068 561 PANTHER HEAT SHOCK 70 KDA PROTEIN 4 470 - -
Psa3g4068 561 Gene3D - 73 128 - -
Psa3g4068 561 Gene3D Actin; Chain A, domain 4 237 320 - -
Psa3g4068 561 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 394 474 IPR029047 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g4068 Psa-Chr3 380212371 380214333 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g4068 1 556 Calmodulin-binding Proteins AT3G12580 60.650 0.0 733